Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E18
(435 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 90 1e-18
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 90 1e-18
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 90 1e-18
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 90 1e-18
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 90 1e-18
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 90 1e-18
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 90 1e-18
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 90 1e-18
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 59 2e-09
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 59 2e-09
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 40 0.002
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 40 0.002
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 38 0.008
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 38 0.008
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 29 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 77
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 6 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 35
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 29 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 77
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 6 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 35
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 63 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 111
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 40 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 69
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 19 FEVVDEHKLRVFYEKRMGQVV 39
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLSV 435
GFPMKQGVLT+ RVRLL+ K HSCYRPRR ERKRKSVRGCIVDAN+SV
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSV 108
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
GFPMKQGVLT+ R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 60 GFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 106
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +1
Query: 289 GFPMKQGVLTNSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
GFPMKQGVLT+ R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 60 GFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 106
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 219 DADLLCDEWKGYVLRVAGGNDKQWLPYETG 308
+AD+L DEWKGY LR+AGGNDKQ P + G
Sbjct: 37 EADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 155 FEVVDEHKLRIFYEKRMGAEV 217
FEVVDEHKLR+FYEKRMG V
Sbjct: 16 FEVVDEHKLRVFYEKRMGQVV 36
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 319 NSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
N R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 41
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 319 NSRVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
N R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 41
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 325 RVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 55
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 325 RVRLLMSKVHSCYRPRRDCERKRKSVRGCIVDANLS 432
R+RLL K+HSC+ PR + RK K+VR V+AN+S
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVS 53
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,107,053
Number of Sequences: 53049
Number of extensions: 321369
Number of successful extensions: 805
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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