Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E16
(443 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0203 + 12986685-12988691 32 0.18
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 0.96
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 30 0.96
03_06_0078 + 31505126-31507933 29 1.3
01_06_0148 - 27007330-27008124 29 1.3
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 29 1.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 29 1.7
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 29 2.2
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 29 2.2
06_03_0355 + 19822110-19824491 28 2.9
11_04_0152 + 14153539-14154060 28 3.9
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 28 3.9
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 27 5.1
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 27 5.1
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 27 6.8
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 27 9.0
07_01_1131 - 10510404-10511000 27 9.0
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 27 9.0
01_01_0922 + 7278912-7279274,7281449-7281572,7282489-7282604,728... 27 9.0
>06_02_0203 + 12986685-12988691
Length = 668
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/90 (26%), Positives = 43/90 (47%)
Frame = +3
Query: 168 SCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAA 347
S L ++ T + V+ + + + T K D E T+L + + P+P+ + +AA
Sbjct: 459 SLLLEISTRAEGVVAAVDALGTTAKFKKA-DHAEPPATTTL---DAEAAMPVPNSNAIAA 514
Query: 348 EKAHQNLLEGVEHFDKTQMTHTTTEEKNSL 437
++AH N G EH K TTT +++
Sbjct: 515 DEAHGNATAG-EHDKKETAEQTTTTSASTV 543
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 0.96
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 135 DLKSQLEGFNTSCLRDVDTNEKIVL 209
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>03_02_0985 - 12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 29.9 bits (64), Expect = 0.96
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 186 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQ-EKNPLPDKDVVAAEKAHQ 362
D EK + +DVA + K GIE D + K T + E N L D + ++
Sbjct: 927 DILEKTKRINDDDVAFHEKMKEHRAGIETLDLSGKKKTVKEWEDNRLSSMDHTSKGGDNE 986
Query: 363 NLLEGVEHFDKTQMTHTTTEEKNSL 437
NL E + K++ ++ N+L
Sbjct: 987 NLNERLSKIKKSEARPEEVQDANAL 1011
>03_06_0078 + 31505126-31507933
Length = 935
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 249 SLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEH-FDKTQMTHTTTEE 425
S F G + TS K ++P+PD VV+ + A +++ + +EH D T+ +
Sbjct: 536 SWFSGRKNVKKTSPKVLSKLRRSPIPDNHVVSFDAAVRSVSQELEHGKDFTEEDCSQNGI 595
Query: 426 KNSLP 440
KN +P
Sbjct: 596 KNVVP 600
>01_06_0148 - 27007330-27008124
Length = 264
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 305 PGEEPSA*QRCCRSGKGTSELTGRRRALRQNANDAHDDGREEF 433
P P++ +RC +SG S L RR + R +H DG+E+F
Sbjct: 143 PSTTPASPRRCRKSGSTGSVLRWRRISERL-VRRSHSDGKEKF 184
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 111 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 203
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 111 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 203
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 207 LPSAEDV--ATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGV 380
L SAED+ A + F + K+D T + T+ E NP K ++ +AH+ L
Sbjct: 244 LESAEDIRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKL---- 299
Query: 381 EHFDK 395
EH+D+
Sbjct: 300 EHYDE 304
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 270 KFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMTHTTTEEK 428
K+D ++ E QEK K + K ++ VE K +M+HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 174 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET---QEKNPLPDKDVVA 344
+ +V +++LP+ E+VATE + +E DA SL T +E +P+ D
Sbjct: 203 VEEVSVTHEVMLPNYEEVATEGDGDTAMAAVEN-DAGSLAETVVMTHEEFVAVPEDDEEE 261
Query: 345 AEKAHQNLLEGV 380
A+ +N G+
Sbjct: 262 ADGDEENDATGL 273
>11_04_0152 + 14153539-14154060
Length = 173
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 299 RNPGEEPSA*QRCCRSGKGTSELTGRRRALRQNANDAHDDG 421
R P E + CCR G + L G+RRA R D G
Sbjct: 83 RRPEAEQWRQRHCCRRGCTSGGLHGKRRAGRGRGGDCDAGG 123
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 265 IPSNRDFWVFSVATSSADGRTIFSFVSTSRKQLVLNPSS*LLRSLATFGKSFREGAS 95
+P ++ F + S+ SSADG T ++K L + S LRSLA+F + + +S
Sbjct: 149 LPYHQQFQLSSL--SSADGLTNIKTDPENKKLLENSASVESLRSLASFSSKYSQSSS 203
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 198 KIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKN 317
K VLPS E++A ++ S GIE+ + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 156 GFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKD 335
G NT+ N + P +E + + +G+ +L P P
Sbjct: 208 GVNTAGSNSDSVNNDLPRPDSESEIVQHIVEGRTEGVSNHSRANLSRENIPRVAPTPQNP 267
Query: 336 VVAAEK-AHQNLL 371
VVA +K H LL
Sbjct: 268 VVAIQKPKHDRLL 280
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 195 EKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVA 344
E+I+ +++ KT + ++DG F TSL + + Q+ P P VA
Sbjct: 222 EEILSSNSQSADNIKTDQHVYDGGAPFPGTSLPN-KAQQPQPYPGNFCVA 270
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 132 NDLKSQLEGFNTSCLRDVDTN--EKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET 305
N L+++ + L D T+ ++ + S D A + S +EK D T++ TET
Sbjct: 543 NLLENRADDNREDALEDAFTSGIDEAAITSGVDEAAMEADAST---VEKNDDTAIDGTET 599
Query: 306 QEKNPLPDKDVV 341
+EK+ + D++
Sbjct: 600 KEKHEKTNDDIL 611
>07_01_1131 - 10510404-10511000
Length = 198
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 299 RNPGEEPSA*QRCCRSGKGTSELTGRRRALRQNANDAHDDG 421
R P E + CCR G + + G+RRA R D +D G
Sbjct: 112 RRPEAEQWRQRHCCRRGCTSGGVRGKRRAGRGRGGD-YDAG 151
>06_02_0041 + 10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 26.6 bits (56), Expect = 9.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 270 KFDATSLKHT----ETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMTHTTTEEKNSL 437
KFD +H TQ+K+PLPDK+ E+ LEG+ + + H +
Sbjct: 867 KFDKRLARHEGEVMSTQQKSPLPDKNGWLVEEV--MTLEGIPVGEYFNILHKIILIVSKF 924
Query: 438 PP 443
PP
Sbjct: 925 PP 926
>01_01_0922 +
7278912-7279274,7281449-7281572,7282489-7282604,
7282683-7282748,7283379-7283413,7283559-7283601,
7284325-7284362,7284448-7284555,7287195-7287252,
7287862-7288003,7288215-7288426,7288544-7288778,
7288874-7288941,7290329-7290602,7291137-7291249,
7291330-7291390,7292170-7292237,7292585-7292622,
7292699-7292888
Length = 783
Score = 26.6 bits (56), Expect = 9.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 186 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPD-KDVVAAEKA-H 359
+T KI+ PS+++ + + I K K E K+P+ D ++ A H
Sbjct: 497 ETGVKIIFPSSKEETCVVLEAKTTEDIRKASEKIAKVLEEAVKSPILDYSHFISLPLAIH 556
Query: 360 QNLLEGVEHF 389
+L+E + HF
Sbjct: 557 PSLVEKLNHF 566
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,098,252
Number of Sequences: 37544
Number of extensions: 268663
Number of successful extensions: 826
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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