Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E14
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 219 2e-57
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 209 1e-54
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 67 8e-12
09_06_0271 + 21959213-21960559 51 8e-07
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 42 4e-04
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 38 0.006
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 33 0.17
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 33 0.22
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 31 0.67
05_04_0077 - 17712043-17712246,17712487-17712522,17712746-177129... 31 0.89
03_04_0180 + 18173005-18173976,18174066-18174170 30 1.5
11_06_0576 - 25127807-25128107,25128241-25128357,25128730-251292... 29 3.6
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 29 3.6
03_06_0603 + 34999083-34999703,35000092-35000177,35000400-350007... 29 3.6
07_03_1086 + 23858419-23859423,23859527-23859610 28 4.7
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 28 6.2
10_08_0986 + 22050631-22051224,22051493-22051703,22051791-220520... 28 6.2
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921... 28 6.2
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 28 6.2
12_01_0468 + 3661177-3661626 27 8.2
08_02_0284 - 15305062-15305170,15305299-15305460,15306348-153064... 27 8.2
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 27 8.2
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 219 bits (534), Expect = 2e-57
Identities = 108/164 (65%), Positives = 134/164 (81%), Gaps = 15/164 (9%)
Frame = +1
Query: 136 YEPPI-PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 312
+EPP P+RVG+K+RK KGP+AA +LP V P ++CRL+LLKLER+KDYLLMEEEF+ QE
Sbjct: 32 FEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQE 91
Query: 313 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 492
RL+P E+K EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 92 RLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQ 151
Query: 493 LEPGCSVLLNHK--------------VHAVVGVLGDDTDPMVSV 582
LEPGCS+L+++K V +VVG+L D+ DPMVSV
Sbjct: 152 LEPGCSILMHNKMAVRCQCLYKAAFQVLSVVGILQDEVDPMVSV 195
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 209 bits (510), Expect = 1e-54
Identities = 95/132 (71%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
Frame = +1
Query: 136 YEPPI-PTRVGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQE 312
+EPP P+RVG+K+RK KGP+AA +LP V P ++CRL+LLKLER+KDYLLMEEEF+ +QE
Sbjct: 34 FEPPAAPSRVGRKQRKQKGPEAAARLPAVAPLSKCRLRLLKLERVKDYLLMEEEFVVSQE 93
Query: 313 RLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQ 492
RL+P E+K EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKDQ
Sbjct: 94 RLRPSEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQ 153
Query: 493 LEPGCSVLLNHK 528
LEPGC++L+++K
Sbjct: 154 LEPGCAILMHNK 165
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/105 (30%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = +1
Query: 271 DYLLMEEEFIRNQER-LKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVG 447
+++ ++EE+++++++ LK + + +EE V ++ P+ +G E++D N+ IV ++ G
Sbjct: 2 EFVEIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDGNNGIVGSTTG 58
Query: 448 SEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMVSV 582
S +YV ILS ++++ L+P SV L+ +A+V VL + D +S+
Sbjct: 59 SNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISL 103
>09_06_0271 + 21959213-21960559
Length = 448
Score = 50.8 bits (116), Expect = 8e-07
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +1
Query: 238 RLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRG-TPMSVGNLEEIID 414
R KL LER ++ L++E+ ++ EE + V L TP+ V L+E++D
Sbjct: 60 REKLESLER--EFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQLDEVVD 117
Query: 415 DNHAIVSTSVGSEH--YVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDD 561
++HA+V+ G E V + +D+ L+P +V LN + A+VGV D
Sbjct: 118 EHHAVVTLGDGCERKMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSD 168
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 41.9 bits (94), Expect = 4e-04
Identities = 35/132 (26%), Positives = 59/132 (44%)
Frame = +1
Query: 181 AKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKV 360
A G DAA + + T R KLL ++ + E ++N K K E++ +
Sbjct: 2 ADGEDAAAARRRASV-TEYRKKLLNCRELESRVSTVRENLKNA---KKDFTKTEDD---L 54
Query: 361 DDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAV 540
L+ +G + +D+ IV S G + V S VDK++L G V+L+ +
Sbjct: 55 KSLQSVGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTI 114
Query: 541 VGVLGDDTDPMV 576
+ L + DP+V
Sbjct: 115 MRTLPREVDPVV 126
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 307 QERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDK 486
++ LK ++ + + L+ +G + +D IV S G + V S VDK
Sbjct: 38 RDNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 97
Query: 487 DQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 576
++L G V+L+ ++ L + DP+V
Sbjct: 98 EKLIAGTRVVLDMTTLTIMRTLPREVDPVV 127
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 33.1 bits (72), Expect = 0.17
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Frame = +1
Query: 283 MEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNH------------- 423
+ +E R L+ +EKI+E + K+ + P VGN+ EI++ N
Sbjct: 30 IRDELQRTNLELESFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDL 89
Query: 424 --------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 576
++ TS ++ ++ VD D+L+PG V +N + ++ L + D V
Sbjct: 90 DSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRV 148
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 32.7 bits (71), Expect = 0.22
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Frame = +1
Query: 280 LMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPMSVGNLEEIIDDNH------------ 423
++++E R ++ +EKI+E + K+ + P VGN+ EI++ N
Sbjct: 32 VLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 91
Query: 424 ---------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLGDDTDPMV 576
++ TS ++ ++ VD ++L+PG V +N + ++ L + D V
Sbjct: 92 LDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRV 151
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 271 DYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLR 372
++L M+EE I+ +E+ K +EEK ++E+ + L+
Sbjct: 532 EFLEMQEELIKEEEKKKEKEEKAKQEKEEKAKLK 565
>05_04_0077 - 17712043-17712246,17712487-17712522,17712746-17712900,
17713431-17713591,17713950-17714110,17714188-17715657,
17715704-17715998,17716461-17717737,17717826-17718137,
17718223-17718356,17718449-17718521,17719994-17720059,
17720748-17720936
Length = 1510
Score = 30.7 bits (66), Expect = 0.89
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 397 LEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVL---LNHKVHAVVGVL 552
L+++ D N+A T + S LS ++KDQ + G ++L LN H V G+L
Sbjct: 1441 LDKVEDTNYAFEGTRKSQSAFFSYLSGIEKDQAD-GIALLTEVLNFSFHNVKGLL 1494
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 331 EKIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 510
E++E S +DDLR M + L + DN + + V++LS D E G +
Sbjct: 56 EELESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALLSRPDPLLQEHGVT 115
Query: 511 VLLN 522
LLN
Sbjct: 116 ALLN 119
>11_06_0576 -
25127807-25128107,25128241-25128357,25128730-25129271,
25129353-25129814,25129893-25130626,25130715-25130742
Length = 727
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 77 ISLVEVAAVTKKMTMIKRRSMNPQFLRGWERRRGKLKVR 193
+ L ++A + + ++ +P ++G +R+RGK KVR
Sbjct: 535 MDLADIAQILAPIKTTRKADSSPPLVKGQKRKRGKGKVR 573
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +1
Query: 247 LLKLERIKDYLLMEEEFIRNQERLKPQE--EKIEEERSKVDD 366
L+++E+ K+ L+E + +ER + +E +K+EEER K ++
Sbjct: 97 LVQIEKEKEAALVEAQHKAERERKEREELEKKLEEERKKAEE 138
>03_06_0603 +
34999083-34999703,35000092-35000177,35000400-35000796,
35000906-35001154,35001522-35001749,35002524-35002973,
35003848-35003961,35004171-35004216,35004408-35004574
Length = 785
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 567 ICVISQYTYYSMDLMIQKYRTSRFQLIFV 481
+ V+S +++YS D+++ KY ++ + FV
Sbjct: 403 LVVLSSFSFYSSDILLYKYELTKLSVRFV 431
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 334 KIEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSV 513
++E S +D LR M + L + DN ++ + V++LS D E G +
Sbjct: 69 ELESPSSSLDSLRRAAMELRLLAKHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTA 128
Query: 514 LLN 522
LLN
Sbjct: 129 LLN 131
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 217 VTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDL 369
+TP KLER K L E + + ++ + + EE+SK+D L
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLDQL 166
>10_08_0986 +
22050631-22051224,22051493-22051703,22051791-22052082,
22052415-22052780,22052878-22052955,22053099-22053327
Length = 589
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 358 VDDLRGT-PMSVGNLEEIIDDNHAIVSTSVG-SEHYVSILSFVDKDQLEPGCSVLLNHKV 531
+D+L P + G + +D + S + V +SF +D E L V
Sbjct: 175 IDELASVIPFTDGTIRTALDTGCGVASWGAYLMDRNVLTMSFAPRDSHEAQVQFALERGV 234
Query: 532 HAVVGVLG 555
AV+GVLG
Sbjct: 235 PAVIGVLG 242
>06_01_1118 -
9213785-9215051,9215811-9215992,9216075-9216611,
9216742-9217224
Length = 822
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 119 MIKRRSMNPQFLRGWERRRGKLKVRMQHSN 208
MI R +P RGW RR+G +K SN
Sbjct: 367 MILRADAHPSRYRGWTRRKGWMKEYFTISN 396
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 217 VTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVDDLRGTPM 384
+TP KLE+ K L+ E + ++ + + EE+SK+D L P+
Sbjct: 168 LTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLDQLSEGPI 223
>12_01_0468 + 3661177-3661626
Length = 149
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 286 EEEFIRNQERLKPQEEKIEEERSKVDD 366
EEE I +E ++ +EE+IEEE K ++
Sbjct: 76 EEEDIEEEEVVEEEEEEIEEEEVKEEE 102
>08_02_0284 -
15305062-15305170,15305299-15305460,15306348-15306485,
15306741-15306754
Length = 140
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 160 VGKKKRKAKGPDAALKLPQVTPHTRCRLKLLKLERIKDYLL-MEEEFIRNQER 315
VG++ R+ +G A PQ + T ++ L E +Y+L ++ +F+R+ E+
Sbjct: 38 VGEEWRRREGEAARSIKPQTSMRTSVKVHKLTTEDAMNYILTIKNKFLRHPEK 90
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 193 DAALKLPQVTPHTRCRLKLLKLERIKDYLLMEEEFIRNQERLKPQEEKIEEERSKVD 363
DA++ +V L+L L +EE+F ++QE L+ + ++ E R K+D
Sbjct: 589 DASISSSKVLQEKCADLELKLLNFRSQIYELEEKFQKSQEELEQRNLELSELRQKLD 645
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,155,833
Number of Sequences: 37544
Number of extensions: 266851
Number of successful extensions: 898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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