Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E14
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    27   0.13 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.1  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.9  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.9  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.9  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.9  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 424 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 546
           AIV  ++GS  +  I  +V +  LE  C+++  H V  ++G
Sbjct: 335 AIVLGAIGSIVFYIISRYVFRSALEDYCNIVATHLVCGILG 375


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 66  FQVSFSLFGIIYFIY 22
           F VSF LF  IY+I+
Sbjct: 472 FPVSFMLFNAIYWIF 486


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 94  YLHQTDFDPFSSIFLFIRNNL 32
           + H  DFD F    L+ +NN+
Sbjct: 115 FYHAKDFDIFFKTALWAKNNI 135


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 94  YLHQTDFDPFSSIFLFIRNNL 32
           + H  DFD F    L+ +NN+
Sbjct: 115 FYHAKDFDIFFKTALWAKNNI 135


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 301 RNQERLKPQEEKIEEERS 354
           R  E+L  +EEK+ EER+
Sbjct: 17  RQYEKLCNEEEKLLEERT 34


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 301 RNQERLKPQEEKIEEERS 354
           R  E+L  +EEK+ EER+
Sbjct: 17  RQYEKLCNEEEKLLEERT 34


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 301 RNQERLKPQEEKIEEERS 354
           R  E+L  +EEK+ EER+
Sbjct: 17  RQYEKLCNEEEKLLEERT 34


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 301 RNQERLKPQEEKIEEERS 354
           R  E+L  +EEK+ EER+
Sbjct: 17  RQYEKLCNEEEKLLEERT 34


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 457 YVSILSFVDKDQLEPGCSVL 516
           Y  I    DK  L+PGC+++
Sbjct: 83  YRMIQDAEDKGLLKPGCTII 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,815
Number of Sequences: 438
Number of extensions: 3459
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)