Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E13
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142655-1|AAI42656.1|  941|Homo sapiens FLJ21062 protein protein.     31   3.0  
BC141834-1|AAI41835.1|  941|Homo sapiens FLJ21062 protein protein.     31   3.0  
BC132771-1|AAI32772.1|  765|Homo sapiens FLJ21062 protein protein.     31   3.0  
AK024715-1|BAB14972.1|  457|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AY607505-1|AAT02107.1|  116|Homo sapiens immunoglobulin heavy ch...    29   9.2  

>BC142655-1|AAI42656.1|  941|Homo sapiens FLJ21062 protein protein.
          Length = 941

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 358 RTSNAALYKKLKRLTSEKCPNRQYTGLSQSDCFFQNYLQTTVSCVPS 498
           RTSNA   KK KRL  +     +Y    Q+  F Q +++   + VPS
Sbjct: 842 RTSNAKTLKKAKRLQEKAIEASRYHKRPQNAIFHQTHIKGLNTTVPS 888


>BC141834-1|AAI41835.1|  941|Homo sapiens FLJ21062 protein protein.
          Length = 941

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 358 RTSNAALYKKLKRLTSEKCPNRQYTGLSQSDCFFQNYLQTTVSCVPS 498
           RTSNA   KK KRL  +     +Y    Q+  F Q +++   + VPS
Sbjct: 842 RTSNAKTLKKAKRLQEKAIEASRYHKRPQNAIFHQTHIKGLNTTVPS 888


>BC132771-1|AAI32772.1|  765|Homo sapiens FLJ21062 protein protein.
          Length = 765

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 358 RTSNAALYKKLKRLTSEKCPNRQYTGLSQSDCFFQNYLQTTVSCVPS 498
           RTSNA   KK KRL  +     +Y    Q+  F Q +++   + VPS
Sbjct: 666 RTSNAKTLKKAKRLQEKAIEASRYHKRPQNAIFHQTHIKGLNTMVPS 712


>AK024715-1|BAB14972.1|  457|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21062 fis, clone CAS01044. ).
          Length = 457

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 358 RTSNAALYKKLKRLTSEKCPNRQYTGLSQSDCFFQNYLQTTVSCVPS 498
           RTSNA   KK KRL  +     +Y    Q+  F Q +++   + VPS
Sbjct: 358 RTSNAKTLKKAKRLQEKAIEASRYHKRPQNAIFHQTHIKGLNTMVPS 404


>AY607505-1|AAT02107.1|  116|Homo sapiens immunoglobulin heavy chain
           CDR3 protein.
          Length = 116

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 295 YTSNSERSEHSIYEIPPNLSTRTSNAALYKKLKRLTSEKCPNRQYTG 435
           +T + + S++S+Y +  N S RT + ALY   K + S  C N  Y G
Sbjct: 63  FTISRDNSKNSLY-LQMN-SLRTEDTALYYCAKDICSRSCVNFDYWG 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,659,459
Number of Sequences: 237096
Number of extensions: 1552229
Number of successful extensions: 3764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3764
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)