Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E13
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.2  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   5.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 434 PVYCLFGHFSDVSLFN 387
           P YCLFGH  +V+L N
Sbjct: 602 PRYCLFGH--NVTLAN 615


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 289  TIYTSNSERSEHSIYEIPPNLSTRTSN 369
            T+YT      E +  ++PPN  T  ++
Sbjct: 1214 TVYTKADNAEEPTSQKVPPNQLTHEAS 1240


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 264  LPPCLRF*IAAACTLNLHLTVFPKDVCLVDY 172
            +PP   F    + TL L L V+P + C + Y
Sbjct: 1501 IPPAATFLSPNSTTLVLRLHVWPDNGCPILY 1531


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 264  LPPCLRF*IAAACTLNLHLTVFPKDVCLVDY 172
            +PP   F    + TL L L V+P + C + Y
Sbjct: 1497 IPPAATFLSPNSTTLVLRLHVWPDNGCPILY 1527


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +3

Query: 264 NVCPLAKQ-DNLHLELGKERTLDLRNSTE 347
           N C   +  DNL  ELG ER L L    E
Sbjct: 618 NFCAFGRYVDNLLGELGGERLLKLAQGDE 646


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
 Frame = +1

Query: 82  LLWWDLSSDTYFRV-----DFDTLFFPTHHPLMNNIID 180
           L+WWD     YF +       +++ +  H   +NN I+
Sbjct: 70  LVWWDHKGIVYFELLPPNRTINSVVYIEHLTKLNNAIE 107


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 198 ETPLNANSGYMPPRSKNVNMVANVCPLAKQDNLHLELGKE 317
           E   NANS      S+      ++    ++ + H E GKE
Sbjct: 749 EASANANSSTSSEESREEKATTSLEAEKREKSEHCEKGKE 788


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,928
Number of Sequences: 438
Number of extensions: 3174
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)