Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E10
(573 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d... 87 2e-17
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA... 87 2e-17
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 63 3e-10
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 63 3e-10
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 63 3e-10
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 63 3e-10
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 63 3e-10
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 63 3e-10
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 63 3e-10
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 63 3e-10
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 63 3e-10
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 63 3e-10
AY051769-1|AAK93193.1| 763|Drosophila melanogaster LD29569p pro... 30 2.6
AE014296-454|AAN12222.1| 416|Drosophila melanogaster CG32306-PC... 30 2.6
AE014296-453|AAF47647.2| 475|Drosophila melanogaster CG32306-PA... 30 2.6
AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD... 30 2.6
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB... 30 2.6
>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
protein protein.
Length = 2895
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +3
Query: 141 LSVDARPYSPQAAPGTDAAGYSGERSGGHNDHLTHHQAQLGERLYPRVHSLHPTFAGKIT 320
L++DARPY+P + +D A NDHL+ H Q+GERLYP++HS++ T A KIT
Sbjct: 2482 LNLDARPYTPPNS--SDNA-----TPESLNDHLSVHLQQIGERLYPKIHSINQTHAPKIT 2534
Query: 321 GMLLELTPAQLLVLLASEDALRQKVREAMDLI 416
GMLLE+ QLL +++S++ LRQKV EA+++I
Sbjct: 2535 GMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2566
>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
protein.
Length = 2885
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +3
Query: 141 LSVDARPYSPQAAPGTDAAGYSGERSGGHNDHLTHHQAQLGERLYPRVHSLHPTFAGKIT 320
L++DARPY+P + +D A NDHL+ H Q+GERLYP++HS++ T A KIT
Sbjct: 2472 LNLDARPYTPPNS--SDNA-----TPESLNDHLSVHLQQIGERLYPKIHSINQTHAPKIT 2524
Query: 321 GMLLELTPAQLLVLLASEDALRQKVREAMDLI 416
GMLLE+ QLL +++S++ LRQKV EA+++I
Sbjct: 2525 GMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2556
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 570 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 625
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +3
Query: 258 LGERLYPRVHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMH 425
LGERLYP + +H AGKITGMLLE+ ++LL ++ ++AL+ KV EA+ ++ +H
Sbjct: 572 LGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQVH 627
>AY051769-1|AAK93193.1| 763|Drosophila melanogaster LD29569p
protein.
Length = 763
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 RPYSPQAAPGT-DAAGYSGERSGGHND--HLTHHQAQLGERLYPRVHSL 293
+P++ + A GT D+ SG+ + N+ HL H Q+Q +R PRV +
Sbjct: 556 KPHTEKLANGTSDSGSDSGKENCASNEQEHLQHQQSQDEDRAPPRVSEM 604
>AE014296-454|AAN12222.1| 416|Drosophila melanogaster CG32306-PC,
isoform C protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 RPYSPQAAPGT-DAAGYSGERSGGHND--HLTHHQAQLGERLYPRVHSL 293
+P++ + A GT D+ SG+ + N+ HL H Q+Q +R PRV +
Sbjct: 209 KPHTEKLANGTSDSGSDSGKENCASNEQEHLQHQQSQDEDRAPPRVSEM 257
>AE014296-453|AAF47647.2| 475|Drosophila melanogaster CG32306-PA,
isoform A protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 RPYSPQAAPGT-DAAGYSGERSGGHND--HLTHHQAQLGERLYPRVHSL 293
+P++ + A GT D+ SG+ + N+ HL H Q+Q +R PRV +
Sbjct: 268 KPHTEKLANGTSDSGSDSGKENCASNEQEHLQHQQSQDEDRAPPRVSEM 316
>AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD,
isoform D protein.
Length = 1851
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 RPYSPQAAPGT-DAAGYSGERSGGHND--HLTHHQAQLGERLYPRVHSL 293
+P++ + A GT D+ SG+ + N+ HL H Q+Q +R PRV +
Sbjct: 1644 KPHTEKLANGTSDSGSDSGKENCASNEQEHLQHQQSQDEDRAPPRVSEM 1692
>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
isoform B protein.
Length = 2197
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 RPYSPQAAPGT-DAAGYSGERSGGHND--HLTHHQAQLGERLYPRVHSL 293
+P++ + A GT D+ SG+ + N+ HL H Q+Q +R PRV +
Sbjct: 1990 KPHTEKLANGTSDSGSDSGKENCASNEQEHLQHQQSQDEDRAPPRVSEM 2038
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,484,189
Number of Sequences: 53049
Number of extensions: 336548
Number of successful extensions: 1023
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -