Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E10
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   1.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.6  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 321 GMLLELTPAQLLVLLASEDALRQKV 395
           G+ + L  A LLVLLA ED + +K+
Sbjct: 3   GLGVSLLVALLLVLLAIEDTMSKKM 27


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 121 QGSHGVCSV*TPDRIPHRLHLVLMPP 198
           QGS G+ S     R+ H LH  L+PP
Sbjct: 343 QGSAGLPSAILAMRLSHPLHGNLLPP 368


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 472 RSDSENTSKSNIASDGCITMRS 407
           R+D  ++ KSN+  D C T +S
Sbjct: 137 RNDRIDSYKSNLKCDKCSTYQS 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,826
Number of Sequences: 438
Number of extensions: 2010
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)