Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E08
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X73114-1|CAA51545.1| 1123|Homo sapiens slow MyBP-C protein.            30   5.4  
BC117217-1|AAI17218.1| 1120|Homo sapiens MYBPC1 protein protein.       30   5.4  
BC092418-1|AAH92418.1| 1123|Homo sapiens myosin binding protein ...    30   5.4  
X66276-1|CAA46987.1| 1138|Homo sapiens C protein protein.              29   9.4  

>X73114-1|CAA51545.1| 1123|Homo sapiens slow MyBP-C protein.
          Length = 1123

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 131  LCGLSETP*LQKESRTIPKDVKLYYHSLFKPKHIHTAYYKVRVFRNTWFMGYY 289
            +CGLSE   + KES  I +D K+Y + +++      A    +   NT+ +  Y
Sbjct: 992  MCGLSEDATMTKESAVIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGY 1044


>BC117217-1|AAI17218.1| 1120|Homo sapiens MYBPC1 protein protein.
          Length = 1120

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 131  LCGLSETP*LQKESRTIPKDVKLYYHSLFKPKHIHTAYYKVRVFRNTWFMGYY 289
            +CGLSE   + KES  I +D K+Y + +++      A    +   NT+ +  Y
Sbjct: 966  MCGLSEDATMTKESAVIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGY 1018


>BC092418-1|AAH92418.1| 1123|Homo sapiens myosin binding protein C,
            slow type protein.
          Length = 1123

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 131  LCGLSETP*LQKESRTIPKDVKLYYHSLFKPKHIHTAYYKVRVFRNTWFMGYY 289
            +CGLSE   + KES  I +D K+Y + +++      A    +   NT+ +  Y
Sbjct: 992  MCGLSEDATMTKESAVIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGY 1044


>X66276-1|CAA46987.1| 1138|Homo sapiens C protein protein.
          Length = 1138

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 131  LCGLSETP*LQKESRTIPKDVKLYYHSLFK 220
            +CGLSE   + KES  I +D K+Y + +++
Sbjct: 1007 MCGLSEDATMTKESAVIARDGKIYKNPVYE 1036


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,507,962
Number of Sequences: 237096
Number of extensions: 1752349
Number of successful extensions: 2597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)