Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E07
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 68 2e-11
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 68 2e-11
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 68 2e-11
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 68 2e-11
AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein pr... 68 2e-11
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 68 2e-11
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 68 2e-11
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 68 2e-11
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 68 2e-11
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 65 2e-10
EF185284-1|ABM69146.1| 925|Homo sapiens tudor domain containing... 30 5.8
AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA seq... 30 5.8
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 421 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 471
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 412 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 462
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 390 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 440
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 412 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 462
>AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein
protein.
Length = 211
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 160 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 210
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 412 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 462
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 390 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 440
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 375 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 425
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 68.1 bits (159), Expect = 2e-11
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLAK+A V+VKF +P
Sbjct: 412 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLP 462
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 65.3 bits (152), Expect = 2e-10
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +2
Query: 11 KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDIP 163
+V++A+ LIA+SGL+I+ DDLDEAA++VV+L EIVTLA A V+VKF +P
Sbjct: 352 RVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLANDAHVDVKFQLP 402
>EF185284-1|ABM69146.1| 925|Homo sapiens tudor domain containing 6
protein.
Length = 925
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -3
Query: 457 YNEYIKLSYSSVLCEFIKLL*KKNDKNYVPCSNYMRVKFXXXXXXXXXXIVNSKTQIIRK 278
Y + I+ S VLC + L +KN+ +PC+ Y+ + K QI
Sbjct: 69 YKDRIRKKESEVLCSTTETLEEKNENMKLPCTEYLSKSVGYKLPNKEILEESYKPQI--- 125
Query: 277 FD*SQNELKLKQRL 236
+ S ELKL Q L
Sbjct: 126 -NSSYKELKLLQSL 138
>AL591242-6|CAH73905.1| 2096|Homo sapiens protein ( Human DNA sequence
from clone RP11-446F17 on chromosome 6 Contains the 5'
end of the CYP39A1 gene for cytochrome P450 subfamily
XXXIX ).
Length = 2096
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -3
Query: 457 YNEYIKLSYSSVLCEFIKLL*KKNDKNYVPCSNYMRVKFXXXXXXXXXXIVNSKTQIIRK 278
Y + I+ S VLC + L +KN+ +PC+ Y+ + K QI
Sbjct: 1161 YKDRIRKKESEVLCSTTETLEEKNENMKLPCTEYLSKSVGYKLPNKEILEESYKPQI--- 1217
Query: 277 FD*SQNELKLKQRL 236
+ S ELKL Q L
Sbjct: 1218 -NSSYKELKLLQSL 1230
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,040,428
Number of Sequences: 237096
Number of extensions: 972400
Number of successful extensions: 2401
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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