Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E07
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...    58   7e-09
Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AC024804-6|AAF60746.1|  162|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF039046-10|AAB94220.2|  233|Caenorhabditis elegans Serpentine r...    28   4.7  
AF039046-9|AAX22285.1|  341|Caenorhabditis elegans Serpentine re...    28   4.7  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = +2

Query: 11  KVNEARKLIAESGLRIVPRDDLDEAAQLVVQLCEIVTLAKKAGVEVKFDI 160
           KV +A+ LIA S LRI+P D+LDEAA++VV+L  IV LA+   V+VKF++
Sbjct: 384 KVEDAKALIATSQLRILPCDNLDEAAKMVVKLSNIVDLARATNVDVKFEL 433


>Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical
           protein F28H7.1 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 275 EFSNYLRFRIYYYCNVIIITYCKLYSHVVTTWNIIFVIFFL 397
           E+S+Y +F I + C++I   Y  L+SH +  + ++F   FL
Sbjct: 83  EYSDYHQFIIAFRCSLISGAYAVLHSHFLYRFFVLFNNQFL 123


>AC024804-6|AAF60746.1|  162|Caenorhabditis elegans Hypothetical
           protein Y51H7BR.3 protein.
          Length = 162

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +2

Query: 257 FILRSIEFSNYLRFRIYYYCNVIIITYCKLYSHVVTTWNIIFVIFFLQ*FNKF 415
           F+L+ ++   YLRF IY+   + +I +CKL   +V+   +  ++  L  F  F
Sbjct: 99  FVLQDLK--RYLRFHIYFNSVITLIYFCKLIILLVSGDMVTSILCILCNFVNF 149


>AF039046-10|AAB94220.2|  233|Caenorhabditis elegans Serpentine
           receptor, class j protein23, isoform a protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 275 EFSNYLRFRIYYYCNVIIITYCKLYSHVVTTWNIIF 382
           E+S + +F I + C+ I  TY  L++H    + ++F
Sbjct: 83  EYSEFNQFIIAFRCSFIAATYAILHAHFTYRFMVLF 118


>AF039046-9|AAX22285.1|  341|Caenorhabditis elegans Serpentine
           receptor, class j protein23, isoform b protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 275 EFSNYLRFRIYYYCNVIIITYCKLYSHVVTTWNIIF 382
           E+S + +F I + C+ I  TY  L++H    + ++F
Sbjct: 83  EYSEFNQFIIAFRCSFIAATYAILHAHFTYRFMVLF 118


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 166  FRDVEFNLDAGFLSECHDLAELHDELRRLVEVIARDN 56
            F ++E  L  G +   +D  EL  EL   VEV+  DN
Sbjct: 2151 FHNIESGLGLGKIESSNDYKELVPELFTTVEVLRNDN 2187


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 166  FRDVEFNLDAGFLSECHDLAELHDELRRLVEVIARDN 56
            F ++E  L  G +   +D  EL  EL   VEV+  DN
Sbjct: 2151 FHNIESGLGLGKIESSNDYKELVPELFTTVEVLRNDN 2187


>U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical
           protein C50F7.4 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = +2

Query: 14  VNEARKLIAESGLRIVPRDDLDEAAQLVV 100
           V+ A++++ +SGL+I+  ++LDEAA   V
Sbjct: 382 VDAAKQIMKKSGLKILTANNLDEAAAKAV 410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,649,431
Number of Sequences: 27780
Number of extensions: 187520
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)