Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_E07
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 25 0.79
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 1.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 3.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 4.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 4.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 4.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.4
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.6 bits (51), Expect = 0.79
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 487 VRKLHNNDSIYNEYIKLSYSSVLCEFIK 404
+ K H I N+YI +Y+S + EF++
Sbjct: 12 ISKNHKEQLISNDYILDNYTSPIVEFLQ 39
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 17 NEARKLIAESGLRIVPRDDLDEAAQLVV 100
NE+ L+ GL ++ D+DE QL++
Sbjct: 44 NESEPLVLSFGLTLMQIIDVDEKNQLLI 71
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 585 INQQFSIQHNMTCYI 541
I+ F+ +HN TCY+
Sbjct: 306 ISSVFTTRHNATCYL 320
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 585 INQQFSIQHNMTCYI 541
I+ F+ +HN TCY+
Sbjct: 12 ISSVFTTRHNATCYL 26
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 475 HNNDSIYNEYIKLSYS 428
+NN++ YN Y KL Y+
Sbjct: 97 YNNNNNYNNYKKLYYN 112
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2
Query: 551 HVIYIWFTT 525
++IYIWFTT
Sbjct: 546 YMIYIWFTT 554
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2
Query: 551 HVIYIWFTT 525
++IYIWFTT
Sbjct: 599 YMIYIWFTT 607
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -3
Query: 130 LSECHDLAELHDELRRLVEVIARDNAEPRLGDQLP 26
+ + HD+++ + + ++EVI D DQ+P
Sbjct: 1 MEQFHDMSDGNIHMSDVIEVIETDTKYNGREDQIP 35
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -3
Query: 130 LSECHDLAELHDELRRLVEVIARDNAEPRLGDQLP 26
+ + HD+++ + + ++EVI D DQ+P
Sbjct: 1 MEQFHDMSDGNIHMSDVIEVIETDTKYNGREDQIP 35
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 490 GAYFYIIGDITQVVNQIYITCHIV 561
G +FY+ GD T + HI+
Sbjct: 1066 GGHFYVCGDCTMAEDVYQTLKHII 1089
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 590 ITLINNFL-FNTI*HVIYIWFTTCVMS 513
I L+ +L F I + IW T CV++
Sbjct: 309 IPLLGKYLLFTMILVTLSIWITVCVLN 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,898
Number of Sequences: 438
Number of extensions: 2635
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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