Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E06
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   5.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.5  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 60  HHENNNGTIEKRNGNTRPN 116
           ++ NNNG  +  NGN   N
Sbjct: 247 NNNNNNGANDNGNGNGASN 265


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 62  MFPRAEFLQPGGS 24
           ++ + EFL PGGS
Sbjct: 64  IYAKCEFLNPGGS 76


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 63  HENNNGTIEKRNGNTRP 113
           HENN  T+ K +   RP
Sbjct: 871 HENNQPTMNKCSDRKRP 887


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 492 LDLCYRSLTVNVYCCASPI 436
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 492 LDLCYRSLTVNVYCCASPI 436
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 492 LDLCYRSLTVNVYCCASPI 436
           + LC   LT +V CC + I
Sbjct: 106 IHLCKLWLTCDVLCCTASI 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,292
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)