Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_E03
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 VGRTAPDPAMNRVLDD 500
           VG  +PDPA+NR L +
Sbjct: 198 VGTWSPDPAINRRLKE 213


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 VGRTAPDPAMNRVLDD 500
           VG  +PDPA+NR L +
Sbjct: 198 VGTWSPDPAINRRLKE 213


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 453 VGRTAPDPAMNRVLDD 500
           VG  +PDPA+NR L +
Sbjct: 198 VGTWSPDPAINRRLKE 213


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 215  GHHLTRSAHSSSGS 256
            GH    SAHS SGS
Sbjct: 1764 GHPTNASAHSRSGS 1777


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 290 NPFAKHVPGHGRFRR 246
           N + +H+PGH +  R
Sbjct: 208 NGYGRHLPGHAQMGR 222


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 359 HVAM*SCSWRNENLSPRGEREA 424
           HV M  C W  +NL   G   A
Sbjct: 6   HVVMSCCCWCCDNLGGPGSSSA 27


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 156 FRKLHNRRLLW 188
           F + HN+ LLW
Sbjct: 797 FEQFHNKELLW 807


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 156 FRKLHNRRLLW 188
           F + HN+ LLW
Sbjct: 835 FEQFHNKELLW 845


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,028
Number of Sequences: 438
Number of extensions: 3525
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)