Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D24
         (536 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111501-1|AAI11502.2|  566|Homo sapiens trypsin domain containi...    64   3e-10
BC016840-1|AAH16840.1|  435|Homo sapiens TYSND1 protein protein.       64   3e-10
AL731540-5|CAI13685.1|  566|Homo sapiens trypsin domain containi...    64   3e-10

>BC111501-1|AAI11502.2|  566|Homo sapiens trypsin domain containing
           1 protein.
          Length = 566

 Score = 64.1 bits (149), Expect = 3e-10
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61  KGDSILAAGYPYFSEMNLPDLRPTVTSGHIN-NVSPSLIQASCCVQSGFSGGPILRITXX 237
           +G+++   G+  F +   P +   + S  +  N +P ++Q +C V SG SGGP+      
Sbjct: 432 EGEAVSVVGFGVFGQSCGPSVTSGILSAVVQVNGTPVMLQTTCAVHSGSSGGPLFSNHSG 491

Query: 238 XXXXXXXXXXXNAKTQLGAYYPYVNMSIPVRVFKQVLHQFILDKDITRLRVIDNDKDIIQ 417
                      +  T  GA YP++N SIP+ V +  L Q+   +D+  LR +D   + ++
Sbjct: 492 NLLGIITSNTRDNNT--GATYPHLNFSIPITVLQPALQQYSQTQDLGGLRELDRAAEPVR 549

Query: 418 AQWNL 432
             W L
Sbjct: 550 VVWRL 554


>BC016840-1|AAH16840.1|  435|Homo sapiens TYSND1 protein protein.
          Length = 435

 Score = 64.1 bits (149), Expect = 3e-10
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61  KGDSILAAGYPYFSEMNLPDLRPTVTSGHIN-NVSPSLIQASCCVQSGFSGGPILRITXX 237
           +G+++   G+  F +   P +   + S  +  N +P ++Q +C V SG SGGP+      
Sbjct: 301 EGEAVSVVGFGVFGQSCGPSVTSGILSAVVQVNGTPVMLQTTCAVHSGSSGGPLFSNHSG 360

Query: 238 XXXXXXXXXXXNAKTQLGAYYPYVNMSIPVRVFKQVLHQFILDKDITRLRVIDNDKDIIQ 417
                      +  T  GA YP++N SIP+ V +  L Q+   +D+  LR +D   + ++
Sbjct: 361 NLLGIITSNTRDNNT--GATYPHLNFSIPITVLQPALQQYSQTQDLGGLRELDRAAEPVR 418

Query: 418 AQWNL 432
             W L
Sbjct: 419 VVWRL 423


>AL731540-5|CAI13685.1|  566|Homo sapiens trypsin domain containing
           1 protein.
          Length = 566

 Score = 64.1 bits (149), Expect = 3e-10
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61  KGDSILAAGYPYFSEMNLPDLRPTVTSGHIN-NVSPSLIQASCCVQSGFSGGPILRITXX 237
           +G+++   G+  F +   P +   + S  +  N +P ++Q +C V SG SGGP+      
Sbjct: 432 EGEAVSVVGFGVFGQSCGPSVTSGILSAVVQVNGTPVMLQTTCAVHSGSSGGPLFSNHSG 491

Query: 238 XXXXXXXXXXXNAKTQLGAYYPYVNMSIPVRVFKQVLHQFILDKDITRLRVIDNDKDIIQ 417
                      +  T  GA YP++N SIP+ V +  L Q+   +D+  LR +D   + ++
Sbjct: 492 NLLGIITSNTRDNNT--GATYPHLNFSIPITVLQPALQQYSQTQDLGGLRELDRAAEPVR 549

Query: 418 AQWNL 432
             W L
Sbjct: 550 VVWRL 554


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,811,509
Number of Sequences: 237096
Number of extensions: 1393256
Number of successful extensions: 2481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)