Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D22
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   314   7e-86
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   314   7e-86
AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p pro...    29   7.1  
AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA...    29   7.1  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  314 bits (771), Expect = 7e-86
 Identities = 147/204 (72%), Positives = 162/204 (79%)
 Frame = +2

Query: 26  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 205
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 206 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 385
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 386 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRF 565
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG+GKG+R+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 566 SQTKGGSRRAAWLRRNTLQLRRKR 637
           SQT GGSRRAAW R+N   + RKR
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  314 bits (771), Expect = 7e-86
 Identities = 147/204 (72%), Positives = 162/204 (79%)
 Frame = +2

Query: 26  MGAYRYIQELYRKKLSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 205
           MGAYRY+QELYRKK SDVMR+LLRIRVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 206 IFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXNSYW 385
           I+RI               TYGKPKSHGVNQLKP R LQSIAEE            NSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120

Query: 386 VAQDSSYKYFEVILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRF 565
           +AQD+SYKYFEVILID  H AIRRDPKINWI   VHKHRE+RGLTSAGKSSRG+GKG+R+
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180

Query: 566 SQTKGGSRRAAWLRRNTLQLRRKR 637
           SQT GGSRRAAW R+N   + RKR
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204


>AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 522 PQGKALVVSARDIASLKPREVPVAPPGYVATPCNCVAS 635
           PQG AL+ SA D +S+ P   PV+PP   +   +  AS
Sbjct: 16  PQGAALLRSA-DSSSISPAISPVSPPALQSKSLHTAAS 52


>AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA
           protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 522 PQGKALVVSARDIASLKPREVPVAPPGYVATPCNCVAS 635
           PQG AL+ SA D +S+ P   PV+PP   +   +  AS
Sbjct: 16  PQGAALLRSA-DSSSISPAISPVSPPALQSKSLHTAAS 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,217,828
Number of Sequences: 53049
Number of extensions: 608321
Number of successful extensions: 1814
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)