Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D21
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004894-1|AAH04894.1| 698|Homo sapiens chromosome 4 open readi... 68 2e-11
AK098215-1|BAC05262.1| 623|Homo sapiens protein ( Homo sapiens ... 68 2e-11
AK074953-1|BAC11311.1| 698|Homo sapiens protein ( Homo sapiens ... 68 2e-11
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 31 2.2
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 31 2.2
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 31 2.2
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 31 2.2
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 31 2.2
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 31 2.2
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 31 2.2
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 31 2.2
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 31 2.2
>BC004894-1|AAH04894.1| 698|Homo sapiens chromosome 4 open reading
frame 14 protein.
Length = 698
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 139 HKSYGTPDLTTPVSQVQCGGCGALLHCNDPAIPGYLPSEILKNRTVTE--LKTIECQRCH 312
H G PD P S V C GCGA LHC D +PGYLP E + L CQRC
Sbjct: 124 HPVVGHPDPALPPSGVNCSGCGAELHCQDAGVPGYLPREKFLRTAEADGGLARTVCQRCW 183
Query: 313 FLKEYNIALDVSVQSEEYEKFVT 381
L + AL + V E+Y + V+
Sbjct: 184 LLSHHRRALRLQVSREQYLELVS 206
Score = 32.3 bits (70), Expect = 0.94
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 401 SLVLLMVDLMDFPCSIWPGIVDIIGPDRPI 490
SLVL MVDL+D P ++ P + ++GP + I
Sbjct: 215 SLVLYMVDLLDLPDALLPDLPALVGPKQLI 244
>AK098215-1|BAC05262.1| 623|Homo sapiens protein ( Homo sapiens
cDNA FLJ40896 fis, clone UTERU2002693. ).
Length = 623
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 139 HKSYGTPDLTTPVSQVQCGGCGALLHCNDPAIPGYLPSEILKNRTVTE--LKTIECQRCH 312
H G PD P S V C GCGA LHC D +PGYLP E + L CQRC
Sbjct: 49 HPVVGHPDPALPPSGVNCSGCGAELHCQDAGVPGYLPREKFLRTAEADGGLARTVCQRCW 108
Query: 313 FLKEYNIALDVSVQSEEYEKFVT 381
L + AL + V E+Y + V+
Sbjct: 109 LLSHHRRALRLQVSREQYLELVS 131
Score = 32.3 bits (70), Expect = 0.94
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 401 SLVLLMVDLMDFPCSIWPGIVDIIGPDRPI 490
SLVL MVDL+D P ++ P + ++GP + I
Sbjct: 140 SLVLYMVDLLDLPDALLPDLPALVGPKQLI 169
>AK074953-1|BAC11311.1| 698|Homo sapiens protein ( Homo sapiens
cDNA FLJ90472 fis, clone NT2RP3002448. ).
Length = 698
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 139 HKSYGTPDLTTPVSQVQCGGCGALLHCNDPAIPGYLPSEILKNRTVTE--LKTIECQRCH 312
H G PD P S V C GCGA LHC D +PGYLP E + L CQRC
Sbjct: 124 HPVVGHPDPALPPSGVSCSGCGAELHCQDAGVPGYLPREKFLRTAEADGGLARTVCQRCW 183
Query: 313 FLKEYNIALDVSVQSEEYEKFVT 381
L + AL + V E+Y + V+
Sbjct: 184 LLSHHRRALRLQVSREQYLELVS 206
Score = 32.3 bits (70), Expect = 0.94
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 401 SLVLLMVDLMDFPCSIWPGIVDIIGPDRPI 490
SLVL MVDL+D P ++ P + ++GP + I
Sbjct: 215 SLVLYMVDLLDLPDALLPDLPALVGPKQLI 244
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 52 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 98
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 PDLTTPVSQVQCG-GCGALLHCNDPAIPGYLPSEILKNRTVTELKTI 294
P L P CG GCG+L D A +L EI + R + + KT+
Sbjct: 56 PGLLRPRGPCACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTL 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,519,974
Number of Sequences: 237096
Number of extensions: 1686713
Number of successful extensions: 3673
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3670
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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