Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D17
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 63 1e-10
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 54 8e-08
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 28 4.8
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 28 4.8
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 28 4.8
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 28 4.8
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 28 4.8
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 28 4.8
U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 28 4.8
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 28 4.8
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 28 4.8
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 28 4.8
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 28 4.8
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical... 27 6.3
AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical ... 27 6.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 8.4
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 63.3 bits (147), Expect = 1e-10
Identities = 49/173 (28%), Positives = 83/173 (47%)
Frame = +3
Query: 9 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 188
H+ + +++ QI E+ AS YL+M +F RD + P AK F + + EEREHA +L+
Sbjct: 9 HSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRV 68
Query: 189 LLMRGELISDVSDLITVKNFEPVYFNSGADALEAALNMESFVTKSIRGVIDVCXXXXXXX 368
+RG + + D+ +N E + + A EAAL +E F +S+
Sbjct: 69 QNLRGGRVV-LQDIQKPENDE---WGTALKAFEAALALEKFNNESL-------------- 110
Query: 369 XXXXXXXXXXELKSRQVKFNDYHLVDYLSGEFLEEQYRGQRELAGKASTLRKL 527
+L S ND HL D++ ++L+EQ + E A + L+++
Sbjct: 111 ---------LKLHSTAGNHNDAHLTDFIEEKYLDEQVKSINEFARMVANLKRV 154
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 53.6 bits (123), Expect = 8e-08
Identities = 46/172 (26%), Positives = 78/172 (45%)
Frame = +3
Query: 9 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 188
H+ + +++ QI E+ AS YL+M AHF RD I AK F + + EER HA +L+
Sbjct: 9 HDEVEAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRI 68
Query: 189 LLMRGELISDVSDLITVKNFEPVYFNSGADALEAALNMESFVTKSIRGVIDVCXXXXXXX 368
+RG ++ + ++ E + + +A EAAL +E S+
Sbjct: 69 QAVRGGRVA----MQNIQKPEKDEWGTVLEAFEAALALERANNASL-------------- 110
Query: 369 XXXXXXXXXXELKSRQVKFNDYHLVDYLSGEFLEEQYRGQRELAGKASTLRK 524
+L + ND HL +Y+ ++LEEQ E A + +++
Sbjct: 111 ---------LKLHGIAEQRNDAHLTNYIQEKYLEEQVHSINEFARHIANIKR 153
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical
protein C13E3.1 protein.
Length = 770
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = -3
Query: 296 QSSLQSIGPAIE--VYRFEVFDGDKIADVRNKL 204
+S+L +G AIE VY V+ G+KIA+ R+++
Sbjct: 706 ESNLTFVGEAIEKDVYMVAVYRGEKIAEDRDRI 738
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 347 AYVNDASDALCYERF-HVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLH 171
A+V+ A Y+ HV+ + IG I YR FD K+ R D+L
Sbjct: 123 AFVDKVGGAGGYDMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLL 182
Query: 170 RMLPLFASRVEEQLRESWT 114
+ +P+ ++++ L S T
Sbjct: 183 KTIPILQNQIDALLEFSVT 201
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 33 HAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRGELI 212
H Q+ +V S+ + AMG D+++ G + + A ++ E ++ Y + + +
Sbjct: 230 HNQLTDDVPVSIIFKAMGVESDFDIVSTIGHEEKYVSAFAQTLEESINAGVY--TQQQAL 287
Query: 213 SDVSDLITVKNFEP 254
+ V+ + + F P
Sbjct: 288 AYVTSKVKARKFTP 301
>AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical
protein F25E5.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 9 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 188
H+P + + +T V HF+RD +N+ F K F + E+ + +D
Sbjct: 220 HSPLAEGLEGNYRTYVTHHFSPQTWNCHFNRD-LNKIQFLK--FGGSKEDLAKFLTDLDK 276
Query: 189 LLMRGELISDVSDLIT 236
+L + +DV +IT
Sbjct: 277 ILGEQGVEADVRSVIT 292
>AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical
protein K02H11.4 protein.
Length = 541
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 457 ANSWRSNTEANVNSPARPRPLGSFW 531
++SW +NT+A ARP L S W
Sbjct: 363 SHSWFANTQATGKIVARPSDLNSMW 387
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = -3
Query: 314 YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHE 192
Y+ H ++ + G + Y F++ +G +I + N ++P+E
Sbjct: 2587 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNE 2625
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = -3
Query: 314 YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHE 192
Y+ H ++ + G + Y F++ +G +I + N ++P+E
Sbjct: 2587 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNE 2625
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = -3
Query: 314 YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHE 192
Y+ H ++ + G + Y F++ +G +I + N ++P+E
Sbjct: 137 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNE 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,840,222
Number of Sequences: 27780
Number of extensions: 228653
Number of successful extensions: 720
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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