Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D16
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 54 7e-08
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 28 3.8
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 28 5.0
Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 8.7
U42848-5|AAN84855.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.7
U42848-4|AAA83610.2| 302|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein. 27 8.7
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 27 8.7
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 54.0 bits (124), Expect = 7e-08
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -1
Query: 502 MRXXXXXXXXXXAGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 323
MR G A+P D++ ILS+VG++AD+E K V+S L GK VEELI G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 322 KLSSM 308
L S+
Sbjct: 61 GLVSV 65
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -1
Query: 463 GKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 308
G ASP+A DV K+L + G++ D E V+ L GK + E+I G+ KLSS+
Sbjct: 14 GNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSV 65
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 89 SCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 196
+C+ + I +TT A T I K + KTE HV +
Sbjct: 107 TCFEFFIQMMQTTCAEFTSNREIFKKLSKTEFHVAI 142
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -1
Query: 439 DVEKILSSVGIEADSEKLKKVISELNGKNVEELI 338
D+ ++LSS G+E + L + ++ +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358
>Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical
protein F07B10.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 35 FFFFLNIPPIYFIETYSPSCYSYNINWNKTTSAAS 139
+FF L IPP + T PS + N++K A+
Sbjct: 195 YFFLLTIPPTVYSPTIHPSTWIIPKNYDKDVFEAA 229
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 436 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 308
+E +S++GI+ D ++ KV+S G ++ L + G S +
Sbjct: 195 IESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAEGSTSDV 237
>U42848-5|AAN84855.1| 283|Caenorhabditis elegans Hypothetical
protein C31H1.6b protein.
Length = 283
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 98 SYNINWNKTTSAASTPTLFIM 160
SYNINW K S PT I+
Sbjct: 56 SYNINWTKLFQECSEPTYTIL 76
>U42848-4|AAA83610.2| 302|Caenorhabditis elegans Hypothetical
protein C31H1.6a protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 98 SYNINWNKTTSAASTPTLFIM 160
SYNINW K S PT I+
Sbjct: 75 SYNINWTKLFQECSEPTYTIL 95
>AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 35 FFFFLNIPPIYFIETYSPSCYSYNINWNKTTSAAS 139
+FF L IPP + T PS + N++K A+
Sbjct: 195 YFFLLTIPPTVYSPTIHPSTWIIPKNYDKDVFEAA 229
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 50 NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 151
+IP Y T++PS Y + +W T PT+
Sbjct: 40 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 73
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 50 NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 151
+IP Y T++PS Y + +W T PT+
Sbjct: 145 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,957,236
Number of Sequences: 27780
Number of extensions: 138741
Number of successful extensions: 456
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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