Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D13
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 125 8e-29
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 125 8e-29
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 124 2e-28
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 79 1e-14
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 2e-05
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 30 4.0
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 30 4.0
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 30 5.3
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 30 5.3
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 30 5.3
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 30 5.3
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 30 5.3
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 30 5.3
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 30 5.3
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.3
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.3
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.3
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.3
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 30 5.3
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 30 5.3
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 30 5.3
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 30 5.3
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 30 5.3
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 241 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 420
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 421 RSQRPI 438
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 241 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 420
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 421 RSQRPI 438
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 241 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 420
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 421 RSQRPI 438
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 125 bits (302), Expect = 8e-29
Identities = 58/126 (46%), Positives = 82/126 (65%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 241 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 420
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 421 RSQRPI 438
RSQ+P+
Sbjct: 119 RSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 124 bits (299), Expect = 2e-28
Identities = 57/126 (45%), Positives = 82/126 (65%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 241 GFTIVYKKAKATNKPVKNIIRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAIL 420
G +V K+ KP + +R AR +L + +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 421 RSQRPI 438
R+Q+P+
Sbjct: 119 RTQKPV 124
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 78.6 bits (185), Expect = 1e-14
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +1
Query: 61 MSSHLNWMIIRNNNAFLVKKANIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 240
MS+HL WM++RN ++FL+K+ K+ +S EPNN+ NS+RYNGLIH+K VGV D K
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66
Query: 241 GFTIVYKK 264
G +V K+
Sbjct: 67 GVVVVIKR 74
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 298 IRRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQRPI 438
+R AR +L + +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 195 QAIVSIRVEVSHIVGFFAERLFDVRLLHEESVIVADNHPIKMRRHFVVLIRKTTITQYTT 16
+A S+R E + + AE L + LHE+ V+ D HP + IR T Q++
Sbjct: 348 RATWSVREE--QVKQWAAEMLVALEALHEQGVLCRDLHPGNLLLDQAGHIRLTYFGQWSE 405
Query: 15 CSPSC 1
P C
Sbjct: 406 VEPQC 410
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 195 QAIVSIRVEVSHIVGFFAERLFDVRLLHEESVIVADNHPIKMRRHFVVLIRKTTITQYTT 16
+A S+R E + + AE L + LHE+ V+ D HP + IR T Q++
Sbjct: 379 RATWSVREE--QVKQWAAEMLVALEALHEQGVLCRDLHPGNLLLDQAGHIRLTYFGQWSE 436
Query: 15 CSPSC 1
P C
Sbjct: 437 VEPQC 441
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.9 bits (64), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 94 NNNAFLVKKANIKKPFSKEPNNVTNLNSYRYN 189
N++ +LV A + PF K+PN + ++YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,012,295
Number of Sequences: 237096
Number of extensions: 1162629
Number of successful extensions: 2090
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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