Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D12
         (86 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   4.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    18   9.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    18   9.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    18   9.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    18   9.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    18   9.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     18   9.5  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 54  TCSSLWISFFHSCRIP 7
           +CSS +  FFH C  P
Sbjct: 418 SCSSFFQQFFH-CYCP 432


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 73  RVISNIYMFIFMDFFF 26
           R+   +  F+F+ FFF
Sbjct: 467 RITFPVAYFMFLTFFF 482


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 73  RVISNIYMFIFMDFFF 26
           R+   +  F+F+ FFF
Sbjct: 453 RITFPVAYFMFLTFFF 468


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 73  RVISNIYMFIFMDFFF 26
           R+   +  F+F+ FFF
Sbjct: 487 RITFPVAYFMFLTFFF 502


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 73  RVISNIYMFIFMDFFF 26
           R+   +  F+F+ FFF
Sbjct: 436 RITFPVAYFMFLTFFF 451


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 32  EIHKDEHVDIRYDANVDH 85
           ++H   HV I Y  + DH
Sbjct: 363 DLHNFGHVAISYIHDPDH 380


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 64  SNIYMFIFMDFFF 26
           SN+  F+F DF F
Sbjct: 219 SNVPYFLFGDFNF 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,772
Number of Sequences: 438
Number of extensions: 184
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 10
effective length of database: 141,963
effective search space used:  2555334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)