Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D06
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 45 6e-05
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 42 3e-04
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 38 0.007
08_02_1332 + 26207164-26207257,26207454-26207530,26207771-262078... 36 0.035
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 33 0.25
04_04_1350 + 32822711-32823063,32823681-32823803,32823890-328239... 32 0.43
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588... 31 0.75
12_01_0079 + 644754-645932,645966-646061,646193-647122 29 2.3
11_01_0078 + 609005-610183,610217-610312,610444-611373 29 2.3
06_03_0022 - 15536811-15536899,15537485-15537664,15537706-155379... 29 2.3
01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711... 29 2.3
11_06_0313 + 22306497-22308938 29 3.0
09_04_0369 - 17009308-17009501,17009528-17009714,17009802-170101... 28 7.0
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 28 7.0
09_06_0179 + 21380018-21380346,21380468-21380595,21380710-213808... 27 9.2
09_03_0080 + 12149885-12150842,12150936-12151007,12151129-121513... 27 9.2
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 27 9.2
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +1
Query: 85 IQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQAPVGSSTNEP 264
+ L MGF +KA T+ GVE AM WLL+H DDP + S + +E
Sbjct: 636 VSQLASMGFNYLHCQKAAISTSNTGVEEAMNWLLSHMDDPDINDPISKDSQAAEQTVDET 695
Query: 265 S 267
S
Sbjct: 696 S 696
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 40 SYNKQ*QKQLLNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADD-PGMQT 216
S + Q +Q ++ +QTL+ GF ++ A KA+A + +E A +W+ +H + + T
Sbjct: 682 SKDSQAAEQTVDETSVQTLVSFGFQEDVARKALAASG-GNIERATDWIFSHPEAFSSVPT 740
Query: 217 EASSS 231
++S+S
Sbjct: 741 DSSTS 745
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 70 LNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQA 237
L+ + I T++EMGF + RAE+A+ VE A +WL +H ++ +Q + +QA
Sbjct: 1205 LDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEE-FVQEDVQLAQA 1259
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 313 SFKCDDCGKLLKDQDEMEFHAAKTNHSSF 399
S +C DCG LL+ +E + HA TNH++F
Sbjct: 5 SLRCGDCGVLLRSVEEAQAHAEATNHANF 33
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +1
Query: 70 LNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQAPVGS 249
+N + L MGF RA +A+ + +E A+ WL H +DP + E A +
Sbjct: 113 VNKEMLADLEAMGFTTARATRALHFSGNSTIEGAINWLSEHQEDPDID-EPLLVPANTIT 171
Query: 250 STNEPS---DAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAK 381
N+PS + + E + A+ K ++ ++ +++++ K
Sbjct: 172 EANKPSLSPEEMKIKAQELRERARKKKEEEERRMEREREKERIRIGK 218
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 280 ASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAKTNHSSF 399
A+ +E + + C CGK + Q E++ H +T H+ F
Sbjct: 31 ANFSESTEAVLNLVCAACGKPCRSQTEVDLHTKRTGHTEF 70
>08_02_1332 +
26207164-26207257,26207454-26207530,26207771-26207841,
26208448-26208502,26209066-26209187,26209272-26209353,
26210070-26210160,26210759-26210982,26211294-26211413,
26211523-26211705
Length = 372
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 103 MGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDP 204
MGFP R+ +A+ + +E A+ WLL H +DP
Sbjct: 17 MGFPTARSIRALHFSGNSSLESAINWLLEHENDP 50
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/104 (25%), Positives = 48/104 (46%)
Frame = +1
Query: 70 LNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQAPVGS 249
LN+ I++L+E K E+ T EP E + ++ +D G+ SQ +
Sbjct: 269 LNLEGIKSLVERATQKSNIERGAKNTGSTAKEPMQEMVKSN-NDTGIIENVDDSQLQKNT 327
Query: 250 STNEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAK 381
STNE D +A + +E K + ++ ++ K Q + + A +
Sbjct: 328 STNE-KDTQKAQ-KQVEKELKQKEKEE-ARMRKQQKKQQEEALR 368
>04_04_1350 +
32822711-32823063,32823681-32823803,32823890-32823986,
32824135-32824170,32824257-32824444,32824688-32824790,
32824914-32825095,32825184-32825261,32825800-32825902,
32825983-32826019,32826117-32826511
Length = 564
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/83 (22%), Positives = 41/83 (49%)
Frame = +1
Query: 37 KSYNKQ*QKQLLNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQT 216
K Y K + +NM +++ L+ +GF K+ A +A+ + N + A++ L + +Q
Sbjct: 364 KKYGKTPMNKAVNMQKLKGLVAIGFEKKLAAEALRI-NENDADKALDLLTDPEQNCILQH 422
Query: 217 EASSSQAPVGSSTNEPSDAARAS 285
+ S + + S ++RA+
Sbjct: 423 KIMSKAKRLSRGSGSGSSSSRAA 445
>03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,
5882570-5882618,5882703-5882941,5883073-5883174,
5883634-5883862
Length = 1529
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 244 GSSTNEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAKTNHSS 396
G + PSD A +STN NQE K D G + ++ A + S
Sbjct: 967 GQRASTPSDVATSSTNSQNQETKQGGDSDAGLASSEMVNLDSTGATMSRES 1017
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 556 KELQDARQRMQELEMQKLVEQRRR 627
KE+ + +R Q EM KLVE+RRR
Sbjct: 228 KEMLEEEERKQREEMAKLVEERRR 251
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 556 KELQDARQRMQELEMQKLVEQRRR 627
KE+ + +R Q EM KLVE+RRR
Sbjct: 228 KEMLEEEERKQREEMAKLVEERRR 251
>06_03_0022 -
15536811-15536899,15537485-15537664,15537706-15537982,
15538680-15538883,15539431-15539496,15539933-15539953,
15541622-15541731,15543244-15544236,15544928-15544955,
15545035-15545093,15545177-15545204,15545453-15545475,
15545784-15545853,15546980-15547033,15547127-15547169,
15548126-15548175
Length = 764
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +1
Query: 112 PKERAEKAMAVTNYKGV----EPAMEWLLAHADDPGMQTEASSSQAPVGSSTNEPSDAAR 279
PK RA+K G+ + A ++ HA + G Q Q P+ S + PS
Sbjct: 392 PKRRAKKTKTAVGPSGLSSDPKSAESVMIKHASNAGHQ------QQPIHSMKSSPSSGLT 445
Query: 280 ASTNEDNQEAKSFK 321
AST E ++FK
Sbjct: 446 ASTEVHELENETFK 459
>01_06_1061 -
34169469-34169624,34170837-34170938,34171029-34171180,
34172087-34172153,34172239-34172419,34172655-34172778,
34174775-34174871,34175929-34176331,34176729-34176888,
34177412-34177486,34177714-34177892,34178224-34178303,
34178561-34179322
Length = 845
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 79 AEIQTLIEMGFPKERAEKAMAVTNY 153
+ I TL+ MGF + A +A+A+TNY
Sbjct: 806 SSIATLVSMGFDRGSAIRALALTNY 830
>11_06_0313 + 22306497-22308938
Length = 813
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 221 ASVCIPGSSACANNHSIAGSTP 156
ASVC+PG + C+ H AG P
Sbjct: 582 ASVCLPGDNNCSCTHRNAGDLP 603
>09_04_0369 -
17009308-17009501,17009528-17009714,17009802-17010167,
17010341-17010450,17012422-17012656
Length = 363
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 266 EGSFVLLPTGA*ELEASVCIPGSSACANNHSIAGSTPL*LVTAIAFS-ARSLGKPISMSV 90
+GS +LLP +L + P + NHS+ G + I+ S + ++ PI +S+
Sbjct: 263 DGSSILLPYRLKQLAQLIKEPNARNLGLNHSVFGKVKAFDLRFISESISFTISIPIPISI 322
Query: 89 CISAIFSSC 63
IS F C
Sbjct: 323 SISIPFFKC 331
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 196 DDPGMQTEASSSQAPVGSSTNEPSDAARASTNEDNQEAKSFKCDDCGK 339
D GMQ + S+ N+ + + S E+ A+SF CD K
Sbjct: 662 DKSGMQNQVSAHGTHESCEQNDQTTESHPSVCENAPHAESFTCDSPSK 709
>09_06_0179 +
21380018-21380346,21380468-21380595,21380710-21380853,
21380938-21381086,21381226-21381361,21381583-21381679,
21382056-21382156,21382354-21382466,21382865-21382936,
21382970-21383161,21383249-21383344,21383463-21383615
Length = 569
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 278 RAASEGSFVLLPTGA*ELEASVCIPGSSACANNHSIAGSTPL*LVTAIAFSARSLGKP-I 102
R S S +LL +EAS I GS + ++ ++ + + S R+LG P +
Sbjct: 213 RLPSISSAILLAAAIGVIEASALILGSEILLSIMGVSHASTMHSPAKLFLSLRALGAPAV 272
Query: 101 SMSVCISAIF 72
+S+ I IF
Sbjct: 273 VVSLAIQGIF 282
>09_03_0080 +
12149885-12150842,12150936-12151007,12151129-12151346,
12153607-12153830,12154004-12154592
Length = 686
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +1
Query: 175 EWLLAHADDPGMQTEASSSQAPVGSSTNEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQ 354
+++ AH DD ++ SSS A V SS SD + + + K+Q
Sbjct: 54 QFVEAHKDDDDIERSPSSSYAIVSSSPPHRSDVNHMKSEASTSVTVTINTSQASSVQKEQ 113
Query: 355 DEMEF 369
F
Sbjct: 114 SVTAF 118
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 283 KHGPRLKAHLYYCPPGPE 230
++GP+LK H+ YC PE
Sbjct: 112 EYGPKLKEHMKYCDAHPE 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,417
Number of Sequences: 37544
Number of extensions: 273105
Number of successful extensions: 863
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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