Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D06
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical ... 75 3e-14
AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical ... 36 0.024
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 30 1.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 2.7
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 2.7
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 29 3.6
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 4.8
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 4.8
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 27 8.3
>AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical
protein F23C8.4 protein.
Length = 299
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/184 (26%), Positives = 81/184 (44%)
Frame = +1
Query: 76 MAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQAPVGSST 255
M+ Q L++MGFP ++AE A N + ++ A++W+ M+T+A + AP + +
Sbjct: 1 MSIAQQLMDMGFPADKAEAAAG--NNRNLDQALDWIEKDGAGVPMETDAPAQAAPGAADS 58
Query: 256 NEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAKTNHSSFXXXXXXXXXXXX 435
P AA SFKCDDCGKLL + D + FHA+KT H +F
Sbjct: 59 GAPPVAA------------SFKCDDCGKLLANDDAIMFHASKTKHENFSESSEAIKPLTA 106
Query: 436 XXXNAQLALLXXXXXXXXXXXXXXXXXXXXXXXXLRIKSGKELQDARQRMQELEMQKLVE 615
A++ + R + GK + ++ ++ E+++ +
Sbjct: 107 EEKAAKVLEIREKIKVHQAKKAKLEAEENREKEKKRREDGKAMISHKEAARDREIREAAQ 166
Query: 616 QRRR 627
RRR
Sbjct: 167 DRRR 170
>AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical
protein C24G6.8 protein.
Length = 316
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 70 LNMAEIQTLIEMGFPKERAEKAMAVTNYKGVEPAMEWLLAHADDPGMQTEASSSQ 234
+N + L+++GF + A A+ TN GVE A+ W++ +++ ++SSS+
Sbjct: 129 VNNEYLAHLLDLGFDEYTAVLALKRTNSAGVEQAVAWIVERSNESDFDEDSSSSE 183
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 166 PAMEWLLAHAD--DPGMQTEASSSQAPVGSSTNEPSDAARASTNEDNQEAKSFKCDDCGK 339
P W+ D DP + P+ ++ +PS A AS +E +++ + K + +
Sbjct: 351 PKSSWMNGVLDPQDPNFSNQGQIRGYPMQKASRKPS-ATTASPSEKDEDEEKLKLSESTR 409
Query: 340 LLKDQDEMEF 369
++ D DE+++
Sbjct: 410 MMWDMDELKY 419
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 298 NQEAKSFKCDDCGKLLKDQDEMEFHA 375
++ +K FKCD C KL + E+ HA
Sbjct: 407 SRRSKDFKCDTCSKLFFTESELNRHA 432
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 175 EWLLAHADDPGMQTEASSSQAPVGSSTNEPSDAARASTNEDNQEA 309
E+L A+ D G+++E SS G TN P++ +R ++NE A
Sbjct: 539 EYLWANLD--GLKSEFDSSVDQFGIQTNRPNERSRTNSNERQSTA 581
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 154 KGVEPAMEWLLAHA-DDPGMQTEASSSQAPVGSSTN-----EPSDAARASTNEDNQEAKS 315
K EP +W +AH+ D+ Q E A S + E SD +ED++E++
Sbjct: 379 KTPEPVDDWEMAHSEDEASAQKEKPKKPATKASDADEDDDEESSDEESDEESEDSEESEE 438
Query: 316 FKCDD 330
DD
Sbjct: 439 SSSDD 443
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 154 KGVEPAMEWLLAHA-DDPGMQTEASSSQAPVGSSTN-----EPSDAARASTNEDNQEAKS 315
K EP +W +AH+ D+ Q E A S + E SD +ED++E++
Sbjct: 379 KTPEPVDDWEMAHSEDEASAQKEKPKKPATKASDADEDDDEESSDEESDEESEDSEESEE 438
Query: 316 FKCDD 330
DD
Sbjct: 439 SSSDD 443
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 139 AVTNYKGVEPAMEWLLAHADDPGMQTEASSSQAPVGS--STNEPSDAARASTNEDNQEAK 312
A TN +LLAH D + S S GS S++E S + +N+ A
Sbjct: 161 APTNLAMQNVIRRYLLAHPDKAFLTPSCSGSSGSSGSSQSSDEASSQCQLCEGSENRMAN 220
Query: 313 SFKCDDC 333
F C+ C
Sbjct: 221 VF-CEQC 226
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 310 KSFKCDDCGKLLKDQDEMEFH 372
K FKC+DCG+ D + H
Sbjct: 273 KPFKCEDCGRFFSRSDHLRTH 293
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 250 STNEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAKTNHSSF 399
S + +++ +E++QE + F C C L DE+ H K HS F
Sbjct: 26 SISSQGSQSQSQKSENDQEIEGFLCPMCMVELGGPDELTVHFEK-EHSDF 74
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 250 STNEPSDAARASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAAKTNHSSF 399
S + +++ +E++QE + F C C L DE+ H K HS F
Sbjct: 26 SISSQGSQSQSQKSENDQEIEGFLCPMCMVELGGPDELTVHFEK-EHSDF 74
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 193 ADDPGMQTEASSSQAPVGSSTNEPSDAARASTNEDNQEAKSFKCDDCGK 339
AD P ++ SS + S A +S+ +D K F C+ CGK
Sbjct: 11 ADSPSPKSLCRSSGIFPFPLPSSNSIFAESSSGDDENSRKKFPCEICGK 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,543,336
Number of Sequences: 27780
Number of extensions: 245042
Number of successful extensions: 931
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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