Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D06
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.8  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 310 KSFKCDDCGKLLKDQDEMEFHAA 378
           K F C  CGK+L  +  ++ H A
Sbjct: 4   KLFTCQLCGKVLCSKASLKRHVA 26


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 616 VQQVSASPAPAFFGVHLGAL 557
           VQQ + SP     G+H GA+
Sbjct: 355 VQQTTNSPVDMRVGIHTGAV 374


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 296 SSFVEARAASEGSFVLLPTGA*ELEASVCIPGSSACANNHSIAGSTPL 153
           S F+   + S G  +    G  ELE  +  PG+  C + +  +G   L
Sbjct: 2   SLFLLLLSTSHGWQIRDRIGDNELEERIIYPGTLWCGHGNKSSGPNEL 49


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +1

Query: 295 DNQEAKSFKCDDCGKLLKDQDEMEFH 372
           + Q  KSF C  C K+      ++ H
Sbjct: 10  EGQAKKSFSCKYCEKVYVSLGALKMH 35


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 296 SSFVEARAASEGSFVLLPTGA*ELEASVCIPGSSACANNHSIAGSTPL 153
           S F+   + S G  +    G  ELE  +  PG+  C + +  +G   L
Sbjct: 7   SLFLLLLSTSHGWQIRDRIGDNELEERIIYPGTLWCGHGNKSSGPNEL 54


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 98  MSVCISAIFSSCFCYCLL 45
           MSVC   +F +   YCL+
Sbjct: 311 MSVCTVFVFMALMEYCLV 328


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 296 SSFVEARAASEGSFVLLPTGA*ELEASVCIPGSSACANNHSIAGSTPL 153
           S F+   + S G  +    G  ELE  +  PG+  C + +  +G   L
Sbjct: 7   SLFLLLLSTSHGWQIRDRIGDNELEERIIYPGTLWCGHGNKSSGPNEL 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,920
Number of Sequences: 438
Number of extensions: 3391
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)