Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_D03
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 44 6e-05
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 43 1e-04
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 43 1e-04
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 41 4e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 40 7e-04
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 40 7e-04
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 40 0.001
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 40 0.001
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 39 0.002
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 39 0.002
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 39 0.002
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 39 0.002
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 38 0.004
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 38 0.004
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 38 0.004
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 38 0.004
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 38 0.005
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 38 0.005
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 38 0.005
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 38 0.005
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 36 0.015
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 35 0.027
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 35 0.027
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 35 0.036
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 35 0.036
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 34 0.047
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 34 0.047
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 33 0.082
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 33 0.082
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 33 0.11
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 33 0.14
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 32 0.25
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 32 0.25
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 31 0.33
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 31 0.33
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 31 0.33
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 31 0.44
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 30 0.77
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 30 0.77
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 30 0.77
U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeas... 30 0.77
U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeas... 30 0.77
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 30 0.77
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 30 0.77
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 30 0.77
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 30 0.77
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 30 0.77
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 30 0.77
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 29 1.8
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 29 2.3
Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 27 5.4
U88176-1|AAO91741.1| 459|Caenorhabditis elegans Hypothetical pr... 27 5.4
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 27 5.4
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 27 5.4
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 5.4
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 27 7.1
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 27 7.1
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 27 7.1
Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 27 9.4
AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 9.4
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 54.8 bits (126), Expect = 3e-08
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
C+IC + + + I CGHI+HH C++QWI + CP CR V
Sbjct: 13 CSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSCRRTV 57
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 53.6 bits (123), Expect = 7e-08
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
CT+C + E+I +C H+FH C+ +W++ +K CP CR ++
Sbjct: 433 CTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREEI 477
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
CT C D E++ C HIFH C+ W++ SCP CR KV
Sbjct: 238 CTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCPVCRQKV 282
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 48.4 bits (110), Expect = 3e-06
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 220 MHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
M C IC + + + C H+FH HCL W +R ++CP CR +
Sbjct: 288 MDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDI 336
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 46.0 bits (104), Expect = 1e-05
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CTICSDLVDPA-ENIYVTKCGHIFHHHCLAQWIERSKSCPQC 354
C IC+++++ A E + C +H+HC+++W++ + CPQC
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 46.0 bits (104), Expect = 1e-05
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CTICSDLVDPA-ENIYVTKCGHIFHHHCLAQWIERSKSCPQC 354
C IC+++++ A E + C +H+HC+++W++ + CPQC
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQC 2148
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
C IC +P E I C H FH C+ +W+ +S +CP C V
Sbjct: 95 CAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSCLEPV 139
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 256 DPAENIYVTKCGHIFHHHCLAQWIERSK--SCPQCRNKVTERCMFR 387
D E +Y CGH+FH C+ W+ K +CP C+ +V + MF+
Sbjct: 323 DEDEKLYKLSCGHVFHEFCIRGWVVVGKLQTCPYCKERVDLQRMFK 368
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPTVSND 411
C +C D + I + C HI+H C+ W+ ++CP C+N + + F + + ND
Sbjct: 227 CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKH--FGYWNDIRND 284
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 44.0 bits (99), Expect = 6e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 271 IYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
+ V C H FH+ CL W+E ++CP CR KV
Sbjct: 106 VIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKV 137
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 232 CTICSDLVDPAEN--IYVTKCGHIFHHHCLAQWIERSKSCPQC 354
C IC + +D EN + +C I+H HC QW+ + +CP+C
Sbjct: 528 CIICREDID-LENGTVQCPRCTEIYHSHCATQWLSQKPTCPKC 569
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVT--KCGHIFHHHCLAQWIERSKSCPQCR 357
C C +P+ YV C H FHH C+ QWI ++ CP C+
Sbjct: 61 CLRCQS--EPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCPLCQ 102
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERS-KSCPQCRNKV-TERCMFRLFPTVS 405
C IC + E + C H+FH +C+ W+ ++ K CP C+ K+ T+ ++
Sbjct: 247 CAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRKIGTDSDSECSTNDLA 306
Query: 406 NDATGGEDAATLQSRLDD 459
+ + G DA L + D+
Sbjct: 307 STSQGPNDATALYNNADN 324
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV-TERCMFRLFPTVSN 408
C +C +L+ + + C H FH CL W+ + SCP CR + + + R P V N
Sbjct: 335 CVVCWELLGTSRRL---PCSHQFHDWCLMWWLAQDSSCPTCRCTIPSPQDQIRQPPEVGN 391
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV-TERCMFRLFPTVSN 408
C +C +L+ + + C H FH CL W+ + SCP CR + + + R P V N
Sbjct: 335 CVVCWELLGTSRRL---PCSHQFHDWCLMWWLAQDSSCPTCRCTIPSPQDQIRQPPEVGN 391
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 232 CTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTE 372
C +C DL+ P + +C H+F C+ W+++ +CP CR +VT+
Sbjct: 337 CAVCHGDLLQPIK----LECTHVFCKFCIETWLDQKSTCPICRAEVTK 380
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIE---RSKSCPQCRNKV 366
C IC +D A++ V+ CGH+F CL+QW++ ++ CP C++ +
Sbjct: 26 CNIC---LDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAI 70
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 40.7 bits (91), Expect = 5e-04
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +1
Query: 100 DSAIQFYFDKRNKYFDVLQNPC*IL---SRNKAPINLSILVSDMHIL-----CTICSDLV 255
+ A+ FY + N F+ L++ C L R + + + SD L C +C + +
Sbjct: 208 NDAVTFYEEFNNCPFNDLESYCCTLFFVDRIECTTSNDLFSSDDTSLTELPTCAVCLERM 267
Query: 256 DPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
D +++ C H FH CL QW + +CP CR
Sbjct: 268 D--DSVLAILCNHSFHARCLEQWAD--NTCPVCR 297
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 40.3 bits (90), Expect = 7e-04
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
C IC + + + V CGH FH C+ W+ + CP C+
Sbjct: 317 CVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQ 358
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 232 CTICSDLVDPAENI--YVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
C+IC D +++ + CGH F + CL W++ +CP CR V
Sbjct: 34 CSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQDTCPMCREAV 80
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 202 SILVSDMHILCTICSDLVD-PAENIYVTKCGHIFHHHCLAQWI--ERSKSCPQCR 357
S L +M + C C E++ +C HIFH CL ++ ++CP+CR
Sbjct: 364 SRLTQEMQLFCNFCGQRYGLKDESLQALRCSHIFHEKCLHTYLLQRTDQTCPKCR 418
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 229 LCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTE 372
+C IC ++ E +T C H FH CL +W+ CP C + E
Sbjct: 603 VCAIC--FIEMKEEARITPCKHYFHGPCLRKWLAVKMVCPLCYTYMKE 648
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 229 LCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIER---SKSCPQCRNKV--TERCMFRLF 393
LC IC D +NI + CGH+ CLA W + +CP CR ++ T R + F
Sbjct: 389 LCKICDD---NEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGTNRVIIDRF 445
Query: 394 PTVSNDATGGEDAATLQSRL 453
+ ++ A + +L
Sbjct: 446 KPTPVEIEKAKNVAAAEKKL 465
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 229 LCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIER---SKSCPQCRNKV--TERCMFRLF 393
LC IC D +NI + CGH+ CLA W + +CP CR ++ T R + F
Sbjct: 389 LCKICDD---NEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGTNRVIIDRF 445
Query: 394 PTVSNDATGGEDAATLQSRL 453
+ ++ A + +L
Sbjct: 446 KPTPVEIEKAKNVAAAEKKL 465
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 229 LCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIER---SKSCPQCRNKV--TERCMFRLF 393
LC IC D +NI + CGH+ CLA W + +CP CR ++ T R + F
Sbjct: 372 LCKICDD---NEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGTNRVIIDRF 428
Query: 394 PTVSNDATGGEDAATLQSRL 453
+ ++ A + +L
Sbjct: 429 KPTPVEIEKAKNVAAAEKKL 448
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 229 LCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIER---SKSCPQCRNKV--TERCMFRLF 393
LC IC D +NI + CGH+ CLA W + +CP CR ++ T R + F
Sbjct: 372 LCKICDD---NEKNIKIEPCGHLLCAKCLANWQDSDGGGNTCPFCRYEIKGTNRVIIDRF 428
Query: 394 PTVSNDATGGEDAATLQSRL 453
+ ++ A + +L
Sbjct: 429 KPTPVEIEKAKNVAAAEKKL 448
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 CTICSDLVDPAENI-YVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPT 399
CTIC D + V KCGH H C+ + IE+S P+C + MF LF T
Sbjct: 176 CTICYLSYDNEARVPRVMKCGHTICHTCVDRIIEQSFGSPKC--PFDRKIMFGLFTT 230
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 CTICSDLVDPAENI-YVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPT 399
CTIC D + V KCGH H C+ + IE+S P+C + MF LF T
Sbjct: 176 CTICYLSYDNEARVPRVMKCGHTICHTCVDRIIEQSFGSPKC--PFDRKIMFGLFTT 230
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
C IC D + + +C FH C +W+ + CP CR
Sbjct: 1026 CAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCR 1067
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
C IC D + + +C FH C +W+ + CP CR
Sbjct: 1060 CAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCR 1101
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 226 ILCTICSDL-VDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
+LCTIC D+ V+P + +C H F C+ Q + ++ CP C+ V
Sbjct: 98 VLCTICYDIIVEP----HTLRCQHSFCKKCIDQCLPLTRKCPSCQQWV 141
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1
Query: 232 CTICSDLVDPAEN----IYVTKCGHIFHHHCLAQWIERS--KSCPQCRNKVT 369
CTIC V + I +C + FH +CL +W E S +CP CRN T
Sbjct: 1395 CTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRNNFT 1446
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 343 CPQCRNKVTERCMFRLFPTVSNDAT 417
C QC+NK C+++ F + SN +T
Sbjct: 1414 CKQCKNKFHSNCLYKWFES-SNQST 1437
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 CTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMF 384
C IC D++ + I C FH C +QW + CP C + + F
Sbjct: 138 CLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNRGMLDPTEF 189
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 172 LSRNKAPINLSILVSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQ 351
L+R K N +L D C+IC + ++ I C I+H C+ W +R CP+
Sbjct: 126 LTRPKITYNDDVLKDDKGE-CSICLEDLEAGHKIARLPCLCIYHKQCIDDWFKRKNCCPE 184
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 37.5 bits (83), Expect = 0.005
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
C IC D + + +C FH C +W+ + CP CR
Sbjct: 735 CAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECPTCR 776
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.015
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
C IC + + + +C FH C +W+ + CP CR
Sbjct: 442 CAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECPTCR 483
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 35.1 bits (77), Expect = 0.027
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 286 CGHIFHHHCLAQWIERSKSCP 348
C H FH HC+++W++ + CP
Sbjct: 77 CNHAFHFHCISRWLKTRQVCP 97
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 35.1 bits (77), Expect = 0.027
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 286 CGHIFHHHCLAQWIERSKSCP 348
C H FH HC+++W++ + CP
Sbjct: 68 CNHAFHFHCISRWLKTRQVCP 88
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 34.7 bits (76), Expect = 0.036
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERS--KSCPQCRNKV 366
CTIC ++ + C H F C+++W+ +S SCP CR V
Sbjct: 68 CTICLS-TRFSQECRIEGCNHSFCFSCISEWVCQSLRPSCPMCRKDV 113
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 34.7 bits (76), Expect = 0.036
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 232 CTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMF 384
C +C D+++ E + + C +H C +W + + CP C + + + F
Sbjct: 891 CLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTCNSGLLDDTEF 942
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 34.3 bits (75), Expect = 0.047
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 232 CTICSD-LVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCM 381
C IC + VDP VTKC H F C + ++S CP C+ TE M
Sbjct: 241 CFICGNPFVDPI----VTKCKHYFCTGCALKSFQKSSKCPICQQN-TENIM 286
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 34.3 bits (75), Expect = 0.047
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 232 CTICSD-LVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCM 381
C IC + VDP VTKC H F C + ++S CP C+ TE M
Sbjct: 241 CFICGNPFVDPI----VTKCKHYFCTGCALKSFQKSSKCPICQQN-TENIM 286
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.082
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 223 HILCTICS-DLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVT 369
H +C IC L P + CGH F + CL CP CR K++
Sbjct: 104 HDICYICYYKLTIPTR---IENCGHEFCYVCLKSNFAMGNDCPVCRGKIS 150
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 33.5 bits (73), Expect = 0.082
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQC 354
C +C D+V + + + C +H C+ +W + + CP C
Sbjct: 900 CLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTC 941
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 217 DMHILCTICSDL-VDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCR 357
D C +C D V+P + +CGH + C+ + ++ CP CR
Sbjct: 3 DEDFCCAVCLDFFVEPC----IIECGHSYCRFCIESHLNINEKCPLCR 46
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 229 LCTICSD--LVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKV 366
+C IC D + + I +C H C A +++S CP C+ ++
Sbjct: 654 ICAICHDEIMTNDKSAIKCERCTKSIHEKCAAPLLQQSVMCPTCKQRM 701
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 220 MHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCP--QCRNKVT 369
M I C +C+DL E + C H F CL + ++ + CP C + +T
Sbjct: 1 MSIWCAVCNDLKPCEEATQLIPCLHTFCTKCLKKSTKKMRVCPVAHCYSSLT 52
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 32.3 bits (70), Expect = 0.19
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +1
Query: 163 C*ILSRNKAPINLSILVSDMHILCTICSDLVDPAENIYVTKC---GHI--FHHHCLAQWI 327
C I+ RN I VS ++C IC D D + + + C G + H+ CL QW+
Sbjct: 2 CTIIERNLETIRSPKEVSTKTVICRICFD-NDTSSDSLIKPCSCSGTVAYVHNGCLEQWV 60
Query: 328 ERSKSCPQCRNKVTERCMFRLFPTVSND 411
R+ S QC + MF L P D
Sbjct: 61 -RTTSNIQC---TICQDMFELIPAGLKD 84
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 31.9 bits (69), Expect = 0.25
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = +1
Query: 286 CGHIFHHHCLAQWI-----ERSKSCPQCRNKVT 369
C H FH HC+ +WI + CP CR T
Sbjct: 100 CRHAFHRHCIDKWIAAPTNQPRAQCPLCRQDWT 132
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 31.9 bits (69), Expect = 0.25
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTK---CGHIFHHHCLAQWIERSK-SCPQCR 357
C IC D ++ ++ + CGH H C+ + S CP CR
Sbjct: 6 CKICFDRFSDTDSEHIPRNLTCGHALCHKCITAMVNNSTVECPFCR 51
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 226 ILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTE 372
+ C IC + E + C H C +W+ CP CR +V E
Sbjct: 24 VQCHICFQVNH--EPVTFLTCKHSICAGCAGRWLSSCSVCPMCRTRVRE 70
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 31.5 bits (68), Expect = 0.33
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQC 354
C +C D+ + E + C +H C +W + + CP C
Sbjct: 519 CLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICPTC 560
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 214 SDMHILCTICSDLVDPAENIYVTKC-GHI--FHHHCLAQWIERSKS--CPQCRNKVTERC 378
+D H++C +C + Y C G I H CL +W++ SK C C +K + +
Sbjct: 47 NDDHLMCRVCRG--NEGSLYYPCLCTGSIKYVHQECLVEWLKYSKKEVCELCNHKYSFQP 104
Query: 379 MFR 387
++R
Sbjct: 105 IYR 107
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 31.1 bits (67), Expect = 0.44
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 229 LCTIC-SDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQ 351
+C IC ++ + A I + CGH+FH HC+ +ER + P+
Sbjct: 3516 VCVICFTERLGAAPCIRLG-CGHMFHFHCVRMILERRWNGPR 3556
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVHN 352
A++ W Q KT PNV I + +WR+G +L+H+
Sbjct: 176 ALLLWCQRKTAGYPNVRIENFTTSWRNGLAFNALIHS 212
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVHN 352
A++ W Q KT PNV I + +WR+G +L+H+
Sbjct: 176 ALLLWCQRKTAGYPNVRIENFTTSWRNGLAFNALIHS 212
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVH 349
A++ W Q+KT PNV + + +WR G +L+H
Sbjct: 164 ALLLWCQMKTAGYPNVNVKNFSTSWRDGLAFNALIH 199
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVH 349
A++ W Q+KT PNV + + +WR G +L+H
Sbjct: 164 ALLLWCQMKTAGYPNVNVKNFSTSWRDGLAFNALIH 199
>U40409-2|AAA81388.3| 759|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform a
protein.
Length = 759
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 268 NIYVTKCGHIFHHHCLAQWIERSKS 342
+I V KCGHIFH C +ER +S
Sbjct: 717 DIKVFKCGHIFHLACSTSEMERRQS 741
>U40409-1|ABO16456.1| 807|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 41, isoform c
protein.
Length = 807
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 268 NIYVTKCGHIFHHHCLAQWIERSKS 342
+I V KCGHIFH C +ER +S
Sbjct: 765 DIKVFKCGHIFHLACSTSEMERRQS 789
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +1
Query: 226 ILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPTVS 405
+LC +C L D + VT CGH + C+ + +++C C+ V T+
Sbjct: 54 LLCPLCDQLFD--RPVMVT-CGHSYCEPCIERHTRDTRACVICKLDVGPFAAMIPSITLD 110
Query: 406 NDATGGEDAATLQSRLDD 459
N ++ ++S DD
Sbjct: 111 NMVRKLKNQENIESSYDD 128
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVH 349
A++ W Q+KT PNV + + +WR G +L+H
Sbjct: 164 ALLLWCQMKTAGYPNVNVKNFSTSWRDGLAFNALIH 199
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVH 349
A++ W Q+KT PNV + + +WR G +L+H
Sbjct: 164 ALLLWCQMKTAGYPNVNVKNFSTSWRDGLAFNALIH 199
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVH 349
A++ W Q+KT PNV + + +WR G +L+H
Sbjct: 164 ALLLWCQMKTAGYPNVNVKNFSTSWRDGLAFNALIH 199
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +1
Query: 226 ILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPTVS 405
+LC +C L D + VT CGH + C+ + +++C C+ V T+
Sbjct: 54 LLCPLCDQLFD--RPVMVT-CGHSYCEPCIERHTRDTRACVICKLDVGPFAAMIPSITLD 110
Query: 406 NDATGGEDAATLQSRLDD 459
N ++ ++S DD
Sbjct: 111 NMVRKLKNQENIESSYDD 128
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 242 AVI*WTQLKTFM*PNVVIYSIIIAWRSG*RDQSLVHN 352
A++ W Q KT PNV I + +WR+G +L+H+
Sbjct: 176 ALLLWCQRKTAGYPNVRIENFTTSWRNGLAFNALIHS 212
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 286 CGHIFHHHCLAQWIERSKSCPQCRNK 363
CG + HH C+ + ++ K+C C K
Sbjct: 187 CGTLVHHGCITERLKLEKTCQWCEVK 212
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Frame = +1
Query: 232 CTICSD---LVDPAENIYVTK---CGHIFHHHCLAQWIERSKSCPQC 354
CT C+D L D Y K C +FH CL IE SC +C
Sbjct: 118 CTNCNDSNYLEDGDVLGYKLKPCFCRKLFHFGCLRSLIEEQASCSEC 164
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = +1
Query: 277 VTKCGHIFHHHCLAQWIERSKS------CPQCRN 360
+T CGHIF C+ Q+ ++SK+ C CR+
Sbjct: 117 LTDCGHIFCCECIIQYWQQSKAIVTPCDCAMCRS 150
>Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical
protein B0564.11 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 286 CGHIFHHHCLAQWIERSKSCPQCRNKVT 369
CGH++ CL W K C C VT
Sbjct: 198 CGHVYCEQCLNSW--NDKPCSVCLKPVT 223
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 CTICSDLVDPAENI-YVTKCGHIFHHHCLAQWIERSKSCPQC 354
C IC D + + V CGH H C+ I S + P C
Sbjct: 190 CPICCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPIC 231
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 169 ILSRNKAPINLSILVSDMHILCTICSDLVDPAENIYV-TKCGHIFHHHCLAQWIERSKSC 345
I+ + K + + I C +C P+ V KCGH+ + C+A R+ +C
Sbjct: 195 IVKKQKLDRKFTSSIGSSDIECVVCDK---PSVIPMVGQKCGHVACYTCIA--TSRNMTC 249
Query: 346 PQC 354
P C
Sbjct: 250 PLC 252
>U88176-1|AAO91741.1| 459|Caenorhabditis elegans Hypothetical
protein F18F11.5 protein.
Length = 459
Score = 27.5 bits (58), Expect = 5.4
Identities = 8/22 (36%), Positives = 19/22 (86%)
Frame = +2
Query: 86 YYMTKILLYSFILIREINILMC 151
+YM++IL++S +L++ I +++C
Sbjct: 306 WYMSRILIFSVLLVKWIGMVLC 327
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/64 (20%), Positives = 29/64 (45%)
Frame = +1
Query: 196 NLSILVSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTER 375
N+ I + ++CT C + + +++ G +H +CL C C N ++ +
Sbjct: 86 NIRIKPDAVIVICTQCQHQIQ--DKFFLSIDGRNYHENCL--------QCSTCENPLSNK 135
Query: 376 CMFR 387
C ++
Sbjct: 136 CFYK 139
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/64 (20%), Positives = 29/64 (45%)
Frame = +1
Query: 196 NLSILVSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTER 375
N+ I + ++CT C + + +++ G +H +CL C C N ++ +
Sbjct: 86 NIRIKPDAVIVICTQCQHQIQ--DKFFLSIDGRNYHENCL--------QCSTCENPLSNK 135
Query: 376 CMFR 387
C ++
Sbjct: 136 CFYK 139
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 232 CTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSC 345
CT+C + CGH H QW +++K C
Sbjct: 790 CTVCRFGI-VGMTFQCNVCGHCMHTDHAYQWFQKTKEC 826
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 211 VSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRN-KVTER 375
V+DMH+ C+I + ++D E + C + H +W + QC N K++E+
Sbjct: 508 VTDMHLRCSIDNKIMDTDEINHYDVCREMIIRH---EWNVSKINEKQCLNSKLSEK 560
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 211 VSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRN-KVTER 375
V+DMH+ C+I + ++D E + C + H +W + QC N K++E+
Sbjct: 411 VTDMHLRCSIDNKIMDTDEINHYDVCREMIIRH---EWNVSKINEKQCLNSKLSEK 463
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 211 VSDMHILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRN-KVTER 375
V+DMH+ C+I + ++D E + C + H +W + QC N K++E+
Sbjct: 422 VTDMHLRCSIDNKIMDTDEINHYDVCREMIIRH---EWNVSKINEKQCLNSKLSEK 474
>Z49968-3|CAA90260.1| 189|Caenorhabditis elegans Hypothetical
protein M110.3 protein.
Length = 189
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Frame = +1
Query: 292 HIFHHHCLAQWIERSKS-----CPQCRNK 363
H HH CLA W ++ + C QC+ +
Sbjct: 41 HWVHHQCLAMWFSKANAVQQVMCIQCQTR 69
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 26.6 bits (56), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 223 HILCTICSDLVDPAENIYVTKCGHIFHHHCLAQWIERSKSCPQCRNKVTE--RCMFRLFP 396
+++C IC+ + + Y +CGH+ C+ I RS+ Q N E C L P
Sbjct: 801 NLVCPICTAETGISNDFYRLECGHVMCRTCINTQI-RSRIDEQQFNIRCEIDGCHRVLTP 859
Query: 397 T-VSNDATGGED 429
+ N GG D
Sbjct: 860 AEIMNIILGGSD 871
>AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical
protein ZC132.4 protein.
Length = 831
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/55 (20%), Positives = 24/55 (43%)
Frame = +1
Query: 295 IFHHHCLAQWIERSKSCPQCRNKVTERCMFRLFPTVSNDATGGEDAATLQSRLDD 459
IFHHH L +W ++ K+ + F + ++ + + ++ S + D
Sbjct: 556 IFHHHQLNEWAQKDPRARSRLEKLQKERQFNVHQALNTLSANKDGTSSKMSLISD 610
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 220 MHILCTICSDLVDPAENIYVTKCGHI 297
+H++C +L DPAE KC H+
Sbjct: 264 VHMVCAGIEELPDPAEPWKCAKCAHM 289
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 220 MHILCTICSDLVDPAENIYVTKCGHI 297
+H++C +L DPAE KC H+
Sbjct: 305 VHMVCAGIEELPDPAEPWKCAKCAHM 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,321,552
Number of Sequences: 27780
Number of extensions: 213631
Number of successful extensions: 597
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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