Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D02
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    25   0.28 
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   3.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   3.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   6.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.9  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   7.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.9  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 103 NICRFSNSYISNNMYNR 153
           N C +SN+Y +NN Y +
Sbjct: 309 NSCNYSNNYYNNNNYKK 325


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 198 YKNNYNDKYYLWDVLIIRGI 257
           Y NNYN K   ++++ I  I
Sbjct: 314 YNNNYNSKKLYYNIINIEQI 333


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 198 YKNNYNDKYYLWDVLIIRGI 257
           Y NNYN K   ++++ I  I
Sbjct: 325 YNNNYNSKKLYYNIINIEQI 344


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 192 FIYKNNYNDKYY 227
           F  +NNYND Y+
Sbjct: 132 FPQENNYNDNYF 143


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 198 YKNNYNDKY 224
           YK NYN+KY
Sbjct: 96  YKYNYNNKY 104


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 174 YIYLTRFIYKNNYNDKY 224
           Y Y     Y NNYN+ Y
Sbjct: 89  YKYSNYNNYNNNYNNNY 105


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 174 YIYLTRFIYKNNYNDKY 224
           Y Y     Y NNYN+ Y
Sbjct: 89  YKYSNYNNYNNNYNNNY 105


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 IYKNNYNDKYY 227
           I+ NNYN K Y
Sbjct: 323 IHNNNYNKKLY 333


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 228 LWDVLIIRGII*RSVKRIYDLCVV 299
           LW VL  +G       R Y  CVV
Sbjct: 453 LWTVLRDKGHFDDGTTRFYTACVV 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,191
Number of Sequences: 438
Number of extensions: 2527
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)