Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_D01
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021962-1|AAH21962.2|  791|Homo sapiens PHF15 protein protein.        30   5.5  
BC009307-1|AAH09307.2|  574|Homo sapiens PHF15 protein protein.        30   5.5  
AK074123-1|BAB84949.1|  639|Homo sapiens FLJ00195 protein protein.     30   5.5  
AJ251833-1|CAB94935.1|  576|Homo sapiens hypothetical protein pr...    30   5.5  

>BC021962-1|AAH21962.2|  791|Homo sapiens PHF15 protein protein.
          Length = 791

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 345 LTHVPVTNWGNSCTRFDSTTHTACVQ-GRPSSITCF 449
           ++H+P + W  SC+     T T C+Q   PS +T F
Sbjct: 299 ISHIPASRWALSCSLCKECTGT-CIQCSMPSCVTAF 333


>BC009307-1|AAH09307.2|  574|Homo sapiens PHF15 protein protein.
          Length = 574

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 345 LTHVPVTNWGNSCTRFDSTTHTACVQ-GRPSSITCF 449
           ++H+P + W  SC+     T T C+Q   PS +T F
Sbjct: 83  ISHIPASRWALSCSLCKECTGT-CIQCSMPSCVTAF 117


>AK074123-1|BAB84949.1|  639|Homo sapiens FLJ00195 protein protein.
          Length = 639

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 345 LTHVPVTNWGNSCTRFDSTTHTACVQ-GRPSSITCF 449
           ++H+P + W  SC+     T T C+Q   PS +T F
Sbjct: 376 ISHIPASRWALSCSLCKECTGT-CIQCSMPSCVTAF 410


>AJ251833-1|CAB94935.1|  576|Homo sapiens hypothetical protein
           protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 345 LTHVPVTNWGNSCTRFDSTTHTACVQ-GRPSSITCF 449
           ++H+P + W  SC+     T T C+Q   PS +T F
Sbjct: 84  ISHIPASRWALSCSLCKECTGT-CIQCSMPSCVTAF 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,726,872
Number of Sequences: 237096
Number of extensions: 1179336
Number of successful extensions: 1912
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)