Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C24
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 0.91
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 0.91
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 1.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 2.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 2.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 2.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 2.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 2.8
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 3.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 3.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 4.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 4.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 6.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 6.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 6.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 6.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 6.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 6.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 8.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.5
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.52
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSR 399
R E + K ER+Y + S R ++ +ER R+P +N+ N + K
Sbjct: 40 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPKIISSL--SNNTIHNNNYKYN 97
Query: 400 YSPKRRRSQNGN 435
Y+ + N N
Sbjct: 98 YNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.52
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSR 399
R E + K ER+Y + S R ++ +ER R+P +N+ N + K
Sbjct: 40 RSREREQNSYKNEREYRKYRETSKERSRDRAERERSREPKIISSL--SNNTIHNNNYKYN 97
Query: 400 YSPKRRRSQNGN 435
Y+ + N N
Sbjct: 98 YNNNNYNNNNYN 109
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 0.91
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEK 393
+S R E K++ E + + S R ++ +ER R+P I N + K
Sbjct: 39 YSRSREREQNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSL-SNKTIHNNNNYK 97
Query: 394 SRYSPKRRRSQN 429
Y+ K + N
Sbjct: 98 YNYNNKYNYNNN 109
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.8 bits (49), Expect = 0.91
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSR 399
R E + K ERKY + S R ++ +ER R+P + N +
Sbjct: 41 RSREREQKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 100
Query: 400 YSPKRRRSQNGN 435
Y+ + N N
Sbjct: 101 YNNYNYNNNNYN 112
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.2
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSR 399
R E + K ERKY + S R ++ +ER R+P + N +
Sbjct: 41 RSREREQKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 100
Query: 400 YSPKRRRSQNGN 435
Y+ ++ N N
Sbjct: 101 YNNYKKLYYNIN 112
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 1.2
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSR 399
R E + K ER+Y + S R ++ +ER R+P + N +
Sbjct: 274 RSREREQNSYKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 333
Query: 400 YSPKRRRSQNGN 435
Y+ N N
Sbjct: 334 YNNNYNNYNNNN 345
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.1
Identities = 16/74 (21%), Positives = 28/74 (37%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEK 393
+S R E K++ + + S R ++ +ER R+P I N + K
Sbjct: 272 YSCSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSL-SNKTIHNNNNYK 330
Query: 394 SRYSPKRRRSQNGN 435
Y+ + N N
Sbjct: 331 YNYNNNNYNNNNYN 344
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKP 336
R E + K ER+Y + S R ++ +ER R+P
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 79
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKP 336
R E + K ER+Y + S R ++ +ER R+P
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 79
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKP 336
R E + K ER+Y + S R ++ +ER R+P
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 79
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKP 336
R E + K ER+Y + S R ++ +ER R+P
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 79
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 RRTESPRTKSKGERKYDS--DISPPRKQENKPKERVRKP 336
R E + K ER+Y + S R ++ +ER R+P
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRTERERSREP 79
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 3.7
Identities = 16/114 (14%), Positives = 43/114 (37%)
Frame = +1
Query: 94 GKMYSDSEDEKNCDSDVSPRQHXXXXXXXXXXXXXXXDSDFSPPRRTESPRTKSKGERKY 273
G+ ++ + +N D+ + Q+ + + R+ ++ K G R+
Sbjct: 420 GRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDN---KQNGNRQN 476
Query: 274 DSDISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEKSRYSPKRRRSQNGN 435
D+ + R+ +NK + ++ D ++ + + + +QN N
Sbjct: 477 DNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDN 530
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 419 LLLLGEYLDFSLLLGDISFVFS 354
L LLG+YL F+++L +S V +
Sbjct: 295 LPLLGKYLLFTMILVGLSVVIT 316
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 4.8
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 358 KTNDISPNRSEKSRYSPKRRRSQNGNTLILM 450
K +D + N+ Y R N N ILM
Sbjct: 439 KLSDSTMNKINNHEYKRSVSRESNSNQFILM 469
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 10 DDGFNSKLQIEEIQKDVEESKKENELIFGKMYSDSEDEK 126
D+G SK ++ + +KD KK+ ++ + ED K
Sbjct: 220 DEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGK 258
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 413 LLGEYLDFSLLLGDIS 366
LLG+YL F+++L IS
Sbjct: 306 LLGKYLIFAMILVSIS 321
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 413 LLGEYLDFSLLLGDIS 366
LLG+YL F+++L IS
Sbjct: 306 LLGKYLIFAMILVSIS 321
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKP 336
+S R E K++ + + S R ++ +ER R+P
Sbjct: 39 YSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREP 79
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 6.4
Identities = 15/63 (23%), Positives = 24/63 (38%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKPSRWGDFEKTNDISPNRSEK 393
+S R E K++ + + S R ++ +ER R+P N I N K
Sbjct: 272 YSRSREREQRSYKNENSYRKYRETSKERSRDRIERERSREPKIISSL-SNNTIHNNNYNK 330
Query: 394 SRY 402
Y
Sbjct: 331 KLY 333
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKP 336
+S R E K++ + + S R ++ +ER R+P
Sbjct: 261 YSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREP 301
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKP 336
+S R E K++ + + S R ++ +ER R+P
Sbjct: 272 YSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREP 312
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKP 336
+S R E K++ + + S R ++ +ER R+P
Sbjct: 272 YSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREP 312
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 214 FSPPRRTESPRTKSKGERKYDSDISPPRKQENKPKERVRKP 336
+S R E K++ + + S R ++ +ER R+P
Sbjct: 261 YSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREP 301
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 217 SPPRRTESPRTKSKGERKYDS 279
+PP R ES R + + +Y+S
Sbjct: 399 TPPSRKESGRRRRRRTPRYNS 419
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 413 LLGEYLDFSLLLGDISFV 360
LLG+YL F+++L +S V
Sbjct: 298 LLGKYLLFTMVLVTLSVV 315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.307 0.128 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,888
Number of Sequences: 438
Number of extensions: 1625
Number of successful extensions: 26
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.1 bits)
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