Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_C22
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   3.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.6  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 33  LLDLHHGLVICSLLRASRYGLATRHGVCS 119
           LL L H  V C +L      L+  H  C+
Sbjct: 54  LLPLRHRRVTCDVLSWQSKWLSINHSACA 82


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 396 SFELKDNGQVTLNGAAHGFPVIEKDVFAFKQT 491
           S+E+   G++TL+    GFP +++ ++A+  T
Sbjct: 634 SYEIPLYGKMTLDDKVFGFP-LDRPMWAWNFT 664


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 396 SFELKDNGQVTLNGAAHGFPVIEKDVFAFKQT 491
           S+E+   G++TL+    GFP +++ ++A+  T
Sbjct: 634 SYEIPLYGKMTLDDKVFGFP-LDRPMWAWNFT 664


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,889
Number of Sequences: 438
Number of extensions: 3277
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)