Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_C19
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.4  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 443 TDANGFKLVITAVKDPIPEHGCKEFR 520
           T+   +  V   + D +P+H C E+R
Sbjct: 235 TETETWTRVFNTLVDLVPKHACAEYR 260


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 100 QCREEQVLLYGIAMQGPLSTTSVQEAGWRRAVVQE 204
           Q R+E  LLY I +      T ++ A W R  V E
Sbjct: 99  QLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNE 133


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 91  NPHQCREEQVLLYGIAMQGPLSTTSVQE 174
           +PHQ ++     YG A+Q P  T SVQ+
Sbjct: 20  HPHQHQQH----YGAAVQVPQQTQSVQQ 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,652
Number of Sequences: 438
Number of extensions: 3088
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)