Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C17
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 57 6e-08
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 57 6e-08
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 57 6e-08
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 57 6e-08
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 57 6e-08
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 57 6e-08
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 57 6e-08
BC038406-1|AAH38406.2| 904|Homo sapiens chromosome 3 open readi... 31 3.2
BC030599-1|AAH30599.1| 782|Homo sapiens C3orf20 protein protein. 31 3.2
AK131481-1|BAD18626.1| 378|Homo sapiens protein ( Homo sapiens ... 31 3.2
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 37 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 94
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 95 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 150
Query: 609 L 611
L
Sbjct: 151 L 151
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 37 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 94
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 95 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 150
Query: 609 L 611
L
Sbjct: 151 L 151
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 37 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 94
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 95 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 150
Query: 609 L 611
L
Sbjct: 151 L 151
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 36 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 93
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 94 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 149
Query: 609 L 611
L
Sbjct: 150 L 150
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 37 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 94
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 95 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 150
Query: 609 L 611
L
Sbjct: 151 L 151
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 37 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 94
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 95 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 150
Query: 609 L 611
L
Sbjct: 151 L 151
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 258 KYYGWLRSLLDRTTHRFDQNSKFVVVEGPVAAGKTEFAASLADDLGMKHFPEANMDIHY- 434
+Y W L D+ + R + S+ + V+G + GK + A +A+ LG KHFPEA IHY
Sbjct: 42 RYGMWHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYP 99
Query: 435 --VRPNGIDLRIFDKQVPEDTRTFDHINFNQTPNHRLAANFQIMMYIARYSQYIDALTHL 608
+G L + +D N ++RL Q +Y +R QY DAL HL
Sbjct: 100 DSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHL 155
Query: 609 L 611
L
Sbjct: 156 L 156
>BC038406-1|AAH38406.2| 904|Homo sapiens chromosome 3 open reading
frame 20 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 208 SHCPRVRRNLRRLTMPTSTMAGCEVFLTAPLTDSIKIANLL 330
S CP V LR+L + T AGC+ + APL +++ L
Sbjct: 664 SDCPLV---LRKLMLKEDTRAGCKCLVKAPLVSDVELERFL 701
>BC030599-1|AAH30599.1| 782|Homo sapiens C3orf20 protein protein.
Length = 782
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 208 SHCPRVRRNLRRLTMPTSTMAGCEVFLTAPLTDSIKIANLL 330
S CP V LR+L + T AGC+ + APL +++ L
Sbjct: 542 SDCPLV---LRKLMLKEDTRAGCKCLVKAPLVSDVELERFL 579
>AK131481-1|BAD18626.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ16655 fis, clone TESTI4038721. ).
Length = 378
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 208 SHCPRVRRNLRRLTMPTSTMAGCEVFLTAPLTDSIKIANLL 330
S CP V LR+L + T AGC+ + APL +++ L
Sbjct: 165 SDCPLV---LRKLMLKEDTRAGCKCLVKAPLVSDVELERFL 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,989,961
Number of Sequences: 237096
Number of extensions: 1755649
Number of successful extensions: 5754
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5718
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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