Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C15
(495 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 32 0.95
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 32 0.95
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 32 0.95
D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein. 30 5.1
AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated prote... 29 6.7
AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kin... 29 6.7
AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein. 29 6.7
AL031663-14|CAO03536.1| 179|Homo sapiens serine peptidase inhib... 29 6.7
AK130753-1|BAC85422.1| 201|Homo sapiens protein ( Homo sapiens ... 29 6.7
AK127721-1|BAC87100.1| 733|Homo sapiens protein ( Homo sapiens ... 29 6.7
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 29 6.7
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 29 6.7
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 29 6.7
AJ222636-1|CAA10896.1| 220|Homo sapiens hypothetical protein pr... 29 6.7
AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein. 29 6.7
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 29 6.7
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 29 6.7
BC109193-1|AAI09194.1| 757|Homo sapiens KIRREL protein protein. 29 8.9
BC109192-1|AAI09193.1| 757|Homo sapiens KIRREL protein protein. 29 8.9
BC082969-1|AAH82969.1| 446|Homo sapiens KIRREL protein protein. 29 8.9
BC067097-1|AAH67097.1| 446|Homo sapiens KIRREL protein protein. 29 8.9
BC051356-1|AAH51356.1| 446|Homo sapiens KIRREL protein protein. 29 8.9
BC025268-1|AAH25268.1| 523|Homo sapiens Unknown (protein for IM... 29 8.9
AY302131-1|AAP59845.1| 593|Homo sapiens NEPH1 protein protein. 29 8.9
AL139010-3|CAH73883.1| 571|Homo sapiens kin of IRRE like (Droso... 29 8.9
AL139010-2|CAH73882.1| 593|Homo sapiens kin of IRRE like (Droso... 29 8.9
AL139010-1|CAH73881.1| 757|Homo sapiens kin of IRRE like (Droso... 29 8.9
AK126751-1|BAC86672.1| 204|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK022708-1|BAB14192.1| 571|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK001707-1|BAA91850.1| 410|Homo sapiens protein ( Homo sapiens ... 29 8.9
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.3 bits (70), Expect = 0.95
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPP----GSPRHAIKDEESPLHHQGYQTTRSYHHDFR 308
HH SR H SP+ E + P GS + I D S +HQG YHH
Sbjct: 224 HHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSE-YHQGDHHPSEYHHG-D 281
Query: 309 NPH 317
+PH
Sbjct: 282 HPH 284
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.3 bits (70), Expect = 0.95
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPP----GSPRHAIKDEESPLHHQGYQTTRSYHHDFR 308
HH SR H SP+ E + P GS + I D S +HQG YHH
Sbjct: 224 HHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSE-YHQGDHHPSEYHHG-D 281
Query: 309 NPH 317
+PH
Sbjct: 282 HPH 284
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 32.3 bits (70), Expect = 0.95
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPP----GSPRHAIKDEESPLHHQGYQTTRSYHHDFR 308
HH SR H SP+ E + P GS + I D S +HQG YHH
Sbjct: 224 HHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSE-YHQGDHHPSEYHHG-D 281
Query: 309 NPH 317
+PH
Sbjct: 282 HPH 284
>D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.
Length = 1805
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 84 MDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESP 257
+DS + H G +K Q Q+H HSP E P PP P E P
Sbjct: 1187 LDSNTVTQGHTAGRKSK----GAKQSQHGSQHHAHSPLEQHPQPPLPPPVPQPQEPQP 1240
>AY834276-1|AAV97884.1| 1042|Homo sapiens mitogen-activated protein
kinase kinase kinase kinase 4 isoform protein.
Length = 1042
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHHQGYQTTRSYHHDFRNPHV 320
H + L +QL Q+ + EC R A + + Q Y S HD R PH
Sbjct: 331 HLEVLQQQLLQEQAML--LECRWREMEEHRQAERLQRQLQQEQAYLL--SLQHDHRRPHP 386
Query: 321 YMSQQSPGSQE 353
SQQ P Q+
Sbjct: 387 QHSQQPPPPQQ 397
>AY212247-1|AAO32626.1| 1239|Homo sapiens Ste20 group protein kinase
HGK protein.
Length = 1239
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHHQGYQTTRSYHHDFRNPHV 320
H + L +QL Q+ + EC R A + + Q Y S HD R PH
Sbjct: 478 HLEVLQQQLLQEQAML--LECRWREMEEHRQAERLQRQLQQEQAYLL--SLQHDHRRPHP 533
Query: 321 YMSQQSPGSQE 353
SQQ P Q+
Sbjct: 534 QHSQQPPPPQQ 544
>AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein.
Length = 432
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 138 PHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAI 239
PHH A +H H P + P PP P H +
Sbjct: 144 PHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMV 177
>AL031663-14|CAO03536.1| 179|Homo sapiens serine peptidase
inhibitor-like, with Kunitz and WAP domains 1 (eppin)
protein.
Length = 179
Score = 29.5 bits (63), Expect = 6.7
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 189 CGDDSAEPTVATGCRDEAVSSCF-PRDV*KKCSCCPFWR 76
C + P + C E + C PRD + CCPF R
Sbjct: 127 CKNKQPCPKIKVECEVEEIDQCTKPRDCPENMKCCPFSR 165
>AK130753-1|BAC85422.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ27243 fis, clone SYN08134. ).
Length = 201
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 17 HEAHLRNPLNAGSGRYPQ*YRQNGQQEHFF*TSRGKHDETASSRHPVATVGSAESSPQSL 196
H H R P + G +RQ+G F +RG H + R+ + GS + S+
Sbjct: 43 HHTHTRGPNDGSCGLSRWRHRQHGDSPEDFFLARGAHLASTRGRNEHSPKGSLQKCLLSI 102
Query: 197 *MRTITARLT 226
R T RL+
Sbjct: 103 --RVQTTRLS 110
>AK127721-1|BAC87100.1| 733|Homo sapiens protein ( Homo sapiens
cDNA FLJ45821 fis, clone NT2RP8001584. ).
Length = 733
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +3
Query: 54 ADDIPNDTARMDSKNTS---SKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGS 224
ADD PN T + + TS + HH +PHH + H+P+ P +
Sbjct: 604 ADDGPNSTPQHTTHLTSHHSTPHHTTPHCTIPHHISPHHSTPHHTTHHTPHRTAP-HRTA 662
Query: 225 PRHAIKDEESPLHHQGYQT 281
P A +P HH T
Sbjct: 663 PYLATSHHTTP-HHTSLPT 680
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 1645 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 1702
Query: 267 QGYQTTRS 290
T +S
Sbjct: 1703 SSSHTAQS 1710
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 1645 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 1702
Query: 267 QGYQTTRS 290
T +S
Sbjct: 1703 SSSHTAQS 1710
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 1645 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 1702
Query: 267 QGYQTTRS 290
T +S
Sbjct: 1703 SSSHTAQS 1710
>AJ222636-1|CAA10896.1| 220|Homo sapiens hypothetical protein
protein.
Length = 220
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 86 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 143
Query: 267 QGYQTTRS 290
T +S
Sbjct: 144 SSSHTAQS 151
>AC005035-1|AAY14969.1| 1260|Homo sapiens unknown protein.
Length = 1260
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +3
Query: 141 HHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHHQGYQTTRSYHHDFRNPHV 320
H + L +QL Q+ + EC R A + + Q Y S HD R PH
Sbjct: 418 HLEVLQQQLLQEQAML--LECRWREMEEHRQAERLQRQLQQEQAYLL--SLQHDHRRPHP 473
Query: 321 YMSQQSPGSQE 353
SQQ P Q+
Sbjct: 474 QHSQQPPPPQQ 484
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-form2
protein.
Length = 2199
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 1645 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 1702
Query: 267 QGYQTTRS 290
T +S
Sbjct: 1703 SSSHTAQS 1710
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 87 DSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLPPGSPRHAIKDEESPLHH 266
D + SS V + KLPH + + +A++ LH+ + + L +KDE PL
Sbjct: 1645 DVEENSSSESVCSGRKLPHRNASA--VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPV 1702
Query: 267 QGYQTTRS 290
T +S
Sbjct: 1703 SSSHTAQS 1710
>BC109193-1|AAI09194.1| 757|Homo sapiens KIRREL protein protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 617 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 667
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 668 PGPAAPAGTDTTSQLSYENYEKFNSH 693
>BC109192-1|AAI09193.1| 757|Homo sapiens KIRREL protein protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 617 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 667
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 668 PGPAAPAGTDTTSQLSYENYEKFNSH 693
>BC082969-1|AAH82969.1| 446|Homo sapiens KIRREL protein protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 306 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 356
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 357 PGPAAPAGTDTTSQLSYENYEKFNSH 382
>BC067097-1|AAH67097.1| 446|Homo sapiens KIRREL protein protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 306 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 356
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 357 PGPAAPAGTDTTSQLSYENYEKFNSH 382
>BC051356-1|AAH51356.1| 446|Homo sapiens KIRREL protein protein.
Length = 446
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 306 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 356
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 357 PGPAAPAGTDTTSQLSYENYEKFNSH 382
>BC025268-1|AAH25268.1| 523|Homo sapiens Unknown (protein for
IMAGE:4860359) protein.
Length = 523
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 383 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 433
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 434 PGPAAPAGTDTTSQLSYENYEKFNSH 459
>AY302131-1|AAP59845.1| 593|Homo sapiens NEPH1 protein protein.
Length = 593
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 453 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 503
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 504 PGPAAPAGTDTTSQLSYENYEKFNSH 529
>AL139010-3|CAH73883.1| 571|Homo sapiens kin of IRRE like
(Drosophila) protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 431 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 481
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 482 PGPAAPAGTDTTSQLSYENYEKFNSH 507
>AL139010-2|CAH73882.1| 593|Homo sapiens kin of IRRE like
(Drosophila) protein.
Length = 593
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 453 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 503
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 504 PGPAAPAGTDTTSQLSYENYEKFNSH 529
>AL139010-1|CAH73881.1| 757|Homo sapiens kin of IRRE like
(Drosophila) protein.
Length = 757
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 617 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 667
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 668 PGPAAPAGTDTTSQLSYENYEKFNSH 693
>AK126751-1|BAC86672.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ44798 fis, clone BRACE3040863. ).
Length = 204
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 99 CSCCPFWRYHWGYRPLPAFNGFLKCAS 19
CSCCP W PLP F F C S
Sbjct: 159 CSCCPGWSAMATQPPLPVFKQF-SCLS 184
>AK022708-1|BAB14192.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ12646 fis, clone NT2RM4001987, weakly similar to
NEURAL CELL ADHESION MOLECULE 1, LARGE ISOFORM
PRECURSOR. ).
Length = 571
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 431 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 481
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 482 PGPAAPAGTDTTSQLSYENYEKFNSH 507
>AK001707-1|BAA91850.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ10845 fis, clone NT2RP4001372, weakly similar to
IRREGULAR CHIASM C-ROUGHEST PROTEIN PRECURSOR. ).
Length = 410
Score = 29.1 bits (62), Expect = 8.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 36 TR*TLVADDIPNDTARMDSKNTSSKHHVGNTTKLPHHDTLSRQLAQQNHLHSPYECEPLP 215
+R L AD AR D + +S H +L +T SR A S Y EP P
Sbjct: 270 SRAVLYADYRAPGPARFDGRPSSRLSHSSGYAQL---NTYSRGPA------SDYGPEPTP 320
Query: 216 PGSPRHAIKDEESPLHHQGYQTTRSY 293
PG A D S L ++ Y+ S+
Sbjct: 321 PGPAAPAGTDTTSQLSYENYEKFNSH 346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,573,219
Number of Sequences: 237096
Number of extensions: 1595496
Number of successful extensions: 7603
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7601
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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