Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C14
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-9|CAA84730.1| 219|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid elo... 30 1.3
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 29 2.3
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 29 2.3
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 27 6.9
Z81487-2|CAB04000.1| 318|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL110477-17|CAJ43446.1| 332|Caenorhabditis elegans Hypothetical... 27 9.1
>Z35663-9|CAA84730.1| 219|Caenorhabditis elegans Hypothetical
protein T04A8.11 protein.
Length = 219
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Frame = +2
Query: 134 IKYFPPPKNYDHIELPERQRLR--VFDKVPLYPSNL--KPPKMQKRLRYMRGPETVHNTL 301
+K + P Y+++ P +L+ V P Y + K K KR+ RG E VH L
Sbjct: 1 MKKYSFPVTYENVRFPPNGQLKLPVMPAEPFYDAEKGEKKYKSTKRMIEARGVEEVHTEL 60
Query: 302 QLKQYGVVATGGGRMRYEHFEMARLVVARRLDMKKMFAIWRIDPPWQPVTXXXXXXXXXX 481
+QYG+ A GG + + F+ + + + L + F++WR+D PW P T
Sbjct: 61 IHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRTKKAQGTRLGG 119
Query: 482 XXXAIDHYVTPIKSGRIILEVGG 550
+I YVTP+++ RIILEVGG
Sbjct: 120 GKGSIQKYVTPVRANRIILEVGG 142
>U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid
elongation protein 6 protein.
Length = 274
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -1
Query: 365 FQNAHTASYHHQLQQHHIALTVMYCALFQGHAYIEDVFAFLVVL-NWK--DKVGP 210
F+ TA + H+L + HIA T Y A + AY+ +F V+ N K D GP
Sbjct: 9 FEVLTTAPFSHELSKKHIAQT-QYAAFWISMAYVVVIFGLKAVMTNRKPFDLTGP 62
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 65 SPTFRISLGLLRPEGTQLTFIAGIKYFPPPKNY---DHIELP 181
SP F+ S+G ++ Q F+ IK FP K Y H+ LP
Sbjct: 321 SPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLP 362
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 65 SPTFRISLGLLRPEGTQLTFIAGIKYFPPPKNY---DHIELP 181
SP F+ S+G ++ Q F+ IK FP K Y H+ LP
Sbjct: 321 SPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLP 362
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -1
Query: 443 AATVDQFSKWQTFSS---CLISWLPLDAPFQNAHTASYHHQLQQHHIALTVMYCA 288
A+ ++ +W F+S C++S P D FQ + HQ + +T MY A
Sbjct: 265 ASKFNRLPRWNNFTSETSCMLSVSPFDPLFQKIGSTFLRHQKKMFGGDVTNMYSA 319
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 143 FPPPKNYDHIELPERQRLRVFDKVPLYPSNLKPPKMQKRLRYMRGPETVHNTLQLKQYG 319
F P +E PE+ + FD + L L+ + + R R E +HN++ LK YG
Sbjct: 538 FAKPDFSKWVETPEKHKNEQFDDI-LGECILEVFEARNRQRPATLQEGLHNSVALKSYG 595
>Z81487-2|CAB04000.1| 318|Caenorhabditis elegans Hypothetical
protein C54E10.3 protein.
Length = 318
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 416 WQTFSSCLISWLPLDAPFQNAHTASYHHQLQQHHIALTVMYCALFQGHAYIEDVFAFLVV 237
+Q ++ LI+ LD+ F N + A + Q+H + V+ +FA + V
Sbjct: 162 FQLWTPILITGRRLDSQFDNIYCAE-DPRFQKHFQLIMVLEVITTFFLPLTLTIFADISV 220
Query: 236 LNWKDKVGPCQKHVIS 189
L WK K+ ++ IS
Sbjct: 221 LTWKTKITMVTQNEIS 236
>AL110477-17|CAJ43446.1| 332|Caenorhabditis elegans Hypothetical
protein Y113G7B.1b protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = -1
Query: 419 KWQTFSSCLISWLPL-DAPFQN-AHTASYHHQLQQHHIALTVMYCALFQGHAYIEDVFAF 246
+W+ S I W P D PF++ H + + L + +++ ++ + A E
Sbjct: 214 QWKQVKSVFIKWFPFDDFPFEHLVHVSCFELNLPRISVSVAIIIRDVLMKTAQFEYGKIR 273
Query: 245 LVVLNWKDKVGPCQKHVISVF 183
L LN D + V+ VF
Sbjct: 274 LYDLNNMDDPPDIEADVVRVF 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,547,815
Number of Sequences: 27780
Number of extensions: 296252
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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