Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C13
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 314 6e-86
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 309 1e-84
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 308 2e-84
01_05_0710 + 24492337-24493053 31 1.2
01_01_1101 + 8731427-8732938 29 2.8
03_05_0145 + 21254448-21255488 29 3.7
01_05_0674 - 24187820-24188713,24188809-24189204 29 3.7
01_05_0610 - 23636097-23638958 29 3.7
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 29 4.9
10_08_0510 + 18430580-18431781,18433176-18433554 29 4.9
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 29 4.9
10_01_0099 - 1202668-1203023,1203097-1206037 29 4.9
03_02_0539 - 9329572-9330729,9330988-9331041 29 4.9
02_04_0582 - 24076614-24076643,24076961-24077440 29 4.9
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 29 4.9
01_06_1283 - 35977646-35978703,35980177-35980272,35980627-35980759 29 4.9
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 6.4
04_04_1667 + 35211776-35212132,35212640-35212727,35213573-352137... 28 6.4
04_01_0393 - 5154558-5154857,5155008-5155072,5158734-5159047,515... 28 6.4
08_01_0915 + 9019499-9020971 28 8.5
06_02_0262 + 13563082-13563633 28 8.5
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 28 8.5
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 8.5
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 314 bits (770), Expect = 6e-86
Identities = 139/208 (66%), Positives = 169/208 (81%)
Frame = +2
Query: 89 RSXLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 268
+ LKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+
Sbjct: 22 KKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISIL 81
Query: 269 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 448
QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+KLCK
Sbjct: 82 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 141
Query: 449 VRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMITG 628
VR V G K +P+L T+DGRT+RYPDPLI ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 142 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTG 201
Query: 629 GRNLGRVGTIVSRERHPGSFDIVHRQDS 712
GRN GRVG I SRE+H GSF+ +H +D+
Sbjct: 202 GRNTGRVGVIKSREKHKGSFETIHVEDA 229
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 309 bits (759), Expect = 1e-84
Identities = 135/208 (64%), Positives = 169/208 (81%)
Frame = +2
Query: 89 RSXLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 268
+ LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 269 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 448
QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 449 VRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMITG 628
VR V G K +PYL T+DGRT+RYPDPLI ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 629 GRNLGRVGTIVSRERHPGSFDIVHRQDS 712
GRN GRVG I +RE+H GSF+ +H +D+
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDA 213
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 308 bits (757), Expect = 2e-84
Identities = 134/208 (64%), Positives = 169/208 (81%)
Frame = +2
Query: 89 RSXLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 268
+ LKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISIL 65
Query: 269 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 448
QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK+KLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 449 VRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMITG 628
VR V G K +PYL T+DGRT+RYPDP+I ND++++D+ TNKI+DFIKFD GN+ M+TG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 629 GRNLGRVGTIVSRERHPGSFDIVHRQDS 712
GRN GRVG I +RE+H GSF+ +H +D+
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDA 213
>01_05_0710 + 24492337-24493053
Length = 238
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = -3
Query: 633 LPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATR 454
L P +RLP S L L M + T +F L++ + +RPS + LLG + +R
Sbjct: 76 LLPGSTERLPFSPLAAH---LASMPTLTPAFALLTAIRHHPLRPSPLPLATPLLGHLLSR 132
Query: 453 RTLHSLYLASSGVIRWI 403
R ++ V+RW+
Sbjct: 133 RRARE----AASVVRWL 145
>01_01_1101 + 8731427-8732938
Length = 503
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 259 KHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAAQLVQ--HP 125
+HL+ L P H R A A L+ + R P R HAA LV+ HP
Sbjct: 29 RHLLQAHAYLLPRGGHRHARVASALLLASLRLPLRDHAAALVRRVHP 75
>03_05_0145 + 21254448-21255488
Length = 346
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 445 QGAARRDRPQERAVPGDARRAHAPVPGPAHQCERLGAARHL 567
+G ARR P++R A A P PA R G HL
Sbjct: 117 KGRARRRTPEQRRPKEAAGNGRARSPSPASAQRRYGGGEHL 157
>01_05_0674 - 24187820-24188713,24188809-24189204
Length = 429
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 451 AARRDRPQERAVPGDARRAHAPVPGPAHQCERLGAARHLHQQD 579
AA R P A A AP P P+HQ ++ +RH D
Sbjct: 149 AANRRAPAAAAKHRPAADQFAPPPAPSHQWAKIKRSRHATDHD 191
>01_05_0610 - 23636097-23638958
Length = 953
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 518 YPDPLINVNDSVQLDISTNKIMDFIKFDSGNLC 616
+P+ + N+ V +D+S N ++ I F+ NLC
Sbjct: 283 FPNEIGNMTSIVDIDLSGNNLVGMIPFNLKNLC 315
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 566 RCRAAPSRSH**AGPGTGACARRASPGTARSWGRSRRAAPCTAC 435
R RAAP + + G GA ASP A WGRS A+ C
Sbjct: 40 RARAAPRLAVSASSAGAGA----ASPSPAAGWGRSDAASSLERC 79
>10_08_0510 + 18430580-18431781,18433176-18433554
Length = 526
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 582 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLY 433
M L + CTE+ + R ++P +T YGTLL AT+ L ++
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPD-ITTYGTLLQGYATKGALVEMH 241
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 582 MILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLY 433
M L + CTE+ + R ++P +T YGTLL AT+ L ++
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPE-ITTYGTLLQGYATKGALVEMH 359
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 509 TLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMIT 625
T R PD + + LD+S N + I GNL MIT
Sbjct: 123 TGRMPDEISELQRLTMLDLSYNNLTGHIPASVGNLTMIT 161
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 427 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQCERLGA--ARHLHQQDHGLHQVR 600
S A AA++ RP A AR A AP P PA +C R + + + ++ L Q R
Sbjct: 58 SSASAAAAAAQQARPNSMAER--ARLARAPQPEPALKCPRCDSTNTKFCYYNNYSLSQPR 115
>02_04_0582 - 24076614-24076643,24076961-24077440
Length = 169
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -1
Query: 584 P*SCWWRCRAAPSRSH**AGPGTGACARRASPGTARSWGRSRRAAPCTACT 432
P C W R RS AG G GA A A P R G+ +AP + T
Sbjct: 68 PVECRWSGRV---RSFAGAGEGAGAAAVPACPAPRRGGGKKPSSAPSPSST 115
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 521 PDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMI 622
P + N+ LD+STN+I FI GNL +I
Sbjct: 248 PTTIGNLTSLKSLDLSTNEITGFIPESIGNLSLI 281
>01_06_1283 - 35977646-35978703,35980177-35980272,35980627-35980759
Length = 428
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 442 VQGAARRDRPQERAVPGDARRAHAPVPG 525
++GA RR R E+A+P + AP PG
Sbjct: 4 LRGAKRRKRQPEKALPAAGQAMPAPAPG 31
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 460 RDRPQERAVPGDARRAHAP--VPGPAHQCERLGAARHLHQQDHGLHQV-RLRQPLHDHRR 630
++R ++R P D+RR H P PG + + A + L + V R R P+ + +R
Sbjct: 375 KERERDRKHPADSRREHTPPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHRHRSPVKEIKR 434
Query: 631 Q 633
+
Sbjct: 435 E 435
>04_04_1667 +
35211776-35212132,35212640-35212727,35213573-35213705,
35213806-35214616
Length = 462
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 3 LELVDPRAADRHEVLSCSKFCSTWRACAKE 92
LE D R +V++C+ C+TWR K+
Sbjct: 71 LEEDDSNWPSRKDVVACASVCTTWRDMCKD 100
>04_01_0393 -
5154558-5154857,5155008-5155072,5158734-5159047,
5159148-5159338
Length = 289
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 509 TLRYPDPLINVNDSVQLDISTNKIMD-FIKFDSGNLCMITGGRNLGRVGTIVSRERH-PG 682
T R + L N + Q I NK++D F FD + + GG G + I+SR +H G
Sbjct: 93 TNRRLNTLFNQAMAQQSMIVINKLLDRFHGFDGVGVLVDVGGGTGGTLEMIMSRHKHITG 152
Query: 683 -SFDIVH 700
+FD+ H
Sbjct: 153 VNFDLPH 159
>08_01_0915 + 9019499-9020971
Length = 490
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 SVPYL-VTHDGRTLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNL 613
S+ Y+ ++H+ T + P+ L N++ LD+S N + + GNL
Sbjct: 426 SINYIYISHNRITGQIPESLGNISQLSSLDLSNNLLYGSVPVSLGNL 472
>06_02_0262 + 13563082-13563633
Length = 183
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 569 WRCRAAPSRSH**AGPGTGACARRASPGTARSWGRSRR--AAPC 444
WRC R AG G G A A WG RR APC
Sbjct: 70 WRCNVGGGRGG--AGSGDGVHASAVGVRGAWQWGGGRREAGAPC 111
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +2
Query: 470 PKSVPYLVTHDGRTLRYPDPLINVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRV 649
PK V YLV+H D + N+N + ST+ F KF S +I R G
Sbjct: 318 PKPVEYLVSHGQSQQEQCDTICNLN---VISSSTDISYAFEKFMSQFFVVIANRREDGCS 374
Query: 650 GTIVSRERH 676
T+ RH
Sbjct: 375 ITLALESRH 383
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 368 FRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGP 472
+ LIYD++G + + P++A L + V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,696,108
Number of Sequences: 37544
Number of extensions: 467676
Number of successful extensions: 1790
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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