Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C11
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 214 3e-56
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 214 3e-56
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 214 3e-56
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 214 3e-56
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 199 1e-51
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 199 1e-51
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 81 6e-16
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 0.39
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 31 0.39
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 31 0.39
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 31 0.52
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 2.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 2.8
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 4.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.8
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 28 4.8
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 27 6.4
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 27 6.4
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 27 8.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.5
AL132898-10|CAC14416.2| 346|Caenorhabditis elegans Hypothetical... 27 8.5
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 27 8.5
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 27 8.5
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 214 bits (523), Expect = 3e-56
Identities = 105/152 (69%), Positives = 119/152 (78%)
Frame = +3
Query: 78 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 257
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 258 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 437
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 438 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 126 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 305
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 306 VLIAGS 323
+++ S
Sbjct: 156 LILGTS 161
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 214 bits (523), Expect = 3e-56
Identities = 105/152 (69%), Positives = 119/152 (78%)
Frame = +3
Query: 78 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 257
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 258 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 437
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 438 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 126 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 305
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 306 VLIAGS 323
+++ S
Sbjct: 156 LILGTS 161
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 214 bits (523), Expect = 3e-56
Identities = 105/152 (69%), Positives = 119/152 (78%)
Frame = +3
Query: 78 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 257
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 258 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 437
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 438 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 126 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 305
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 306 VLIAGS 323
+++ S
Sbjct: 156 LILGTS 161
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 214 bits (523), Expect = 3e-56
Identities = 105/152 (69%), Positives = 119/152 (78%)
Frame = +3
Query: 78 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSII 257
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 258 PVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVG 437
PV+MAGII IYGLVVA+++ G + S Y L KGF HL AGL G GL AG+AIGIVG
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVG 120
Query: 438 DAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
DAGVRGTAQQPRLFVGMILILIF+EVLGLYG+
Sbjct: 121 DAGVRGTAQQPRLFVGMILILIFSEVLGLYGM 152
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 126 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVA 305
F + A LGA Y G +P + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 306 VLIAGS 323
+++ S
Sbjct: 156 LILGTS 161
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 199 bits (485), Expect = 1e-51
Identities = 92/144 (63%), Positives = 114/144 (79%)
Frame = +3
Query: 102 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 281
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 282 AIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 461
AIYGLVVAV+++G ++ NYT+ F GL G GL AG+AIGI GDAGVR +
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 462 QQPRLFVGMILILIFAEVLGLYGL 533
QQPR+FVGMILILIFAEVLGLYG+
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGM 160
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 168 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAGS 323
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA+++ +
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALILGAT 169
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 199 bits (485), Expect = 1e-51
Identities = 92/144 (63%), Positives = 114/144 (79%)
Frame = +3
Query: 102 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGII 281
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMAGI+
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIV 76
Query: 282 AIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 461
AIYGLVVAV+++G ++ NYT+ F GL G GL AG+AIGI GDAGVR +
Sbjct: 77 AIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
Query: 462 QQPRLFVGMILILIFAEVLGLYGL 533
QQPR+FVGMILILIFAEVLGLYG+
Sbjct: 137 QQPRMFVGMILILIFAEVLGLYGM 160
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 168 LGAAYGTAKSG-TGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAGS 323
LGA Y +G G+ A++ +P + I+ ++ A ++ +YG++VA+++ +
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVALILGAT 169
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 80.6 bits (190), Expect = 6e-16
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Frame = +3
Query: 135 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 314
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 315 AGSL------DQPSNN-------YTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 455
G L D P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 456 TAQQPRLFVGMILILIFAEVLGLYGL 533
A P LFV +++I IFA +GL+G+
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGM 199
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +3
Query: 240 IMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGF----SGL 407
I+K+ + + + I G + +++G + + L H+ AGL +GF S L
Sbjct: 6 ILKTTATLTVITTLIILGTGLFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVL 65
Query: 408 AAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
AG+ I G + + G + PR+ ++ +IF E + ++G+
Sbjct: 66 GAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGI 107
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 80.6 bits (190), Expect = 6e-16
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Frame = +3
Query: 135 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLI 314
+G ++ S LGA +G +G+ I V P K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 315 AGSL------DQPSNN-------YTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 455
G L D P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 456 TAQQPRLFVGMILILIFAEVLGLYGL 533
A P LFV +++I IFA +GL+G+
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGM 199
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +3
Query: 240 IMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGF----SGL 407
I+K+ + + + I G + +++G + + L H+ AGL +GF S L
Sbjct: 6 ILKTTATLTVITTLIILGTGLFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVL 65
Query: 408 AAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 533
AG+ I G + + G + PR+ ++ +IF E + ++G+
Sbjct: 66 GAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGI 107
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2
Query: 323 GTCNQDSYDQSVDGNDTRHDNGNDGF 246
G NQDSYDQ GND +D GN G+
Sbjct: 345 GNANQDSYDQ---GNDYGNDYGNAGY 367
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 249 SIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLA 389
S+ V MA + YGLV+A+ DQ + TL+ G+ HL G+A
Sbjct: 342 SVCIVFMATALVYYGLVMALS-----DQSAPGRTLFTGYFHLNNGIA 383
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 249 SIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLA 389
S+ V MA + YGLV+A+ DQ + TL+ G+ HL G+A
Sbjct: 488 SVCIVFMATALVYYGLVMALS-----DQSAPGRTLFTGYFHLNNGIA 529
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -3
Query: 523 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARP 380
RP T A R+R P L PR P T A P +RP T RP
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -3
Query: 523 RPNTSAKMRIRIIPTNNLGCWAVPRTPASPTMPMAKPAARPEKPTARP 380
RP T A R+R P L PR P T A P +RP T RP
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 451 RTPASPTMPMAKPAARPEKPTARPAPK 371
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 457 VPRTPASPTMPMAKPAARPE-KPTARPAPK 371
VP P PT P +P RPE +P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPEPQPEPQPEPQ 125
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3
Query: 451 RTPASPTMPMAKPAARPEKPTARPAPK 371
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEKPTARPAPK 371
P P +P P AKP RP + + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEKPTARPAPK 371
P P +P P AKP RP + + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 185 HSQVRHRYCRHGGDAA*ADHEIHHS-RCHGGYHCH 286
H + H HGG +E HH HGG+H H
Sbjct: 50 HHEESHHGEHHGGHHGVQHYESHHESHHHGGHHGH 84
>Z69634-6|CAD01081.2| 490|Caenorhabditis elegans Hypothetical
protein B0001.8 protein.
Length = 490
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 441 HHRRCL--WRNRPLDQRNLRRDQHP 373
H +R + +RN+ DQRN RRD +P
Sbjct: 182 HRQRSISPFRNQQFDQRNSRRDNYP 206
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 454 PRTPASPTM--PMAKPAARPEKPTARPAPK 371
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 454 PRTPASPTM--PMAKPAARPEKPTARPAPK 371
PRTP +P + P +P A +P A P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 454 PRTPASPTM--PMAKPAARPEKPTARPAPK 371
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 454 PRTPASPTM--PMAKPAARPEKPTARPAPK 371
PRTP +P + P +P A +P A P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEK--PTARPAPK*MNP 359
P PA P+MP + A+PE P P P P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 445 PASPTMPMAKPAARPEKPTARPAPK 371
P+S +P A+P+A KP +P PK
Sbjct: 668 PSSSEVPPAEPSAPEPKPAPKPDPK 692
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEKPTARPAPK 371
P P SP+ P P +RP++P P+
Sbjct: 36 PPRPPSPSRPQRPPPSRPQRPPPPRQPR 63
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 445 PASPTMPMAKPAARPEKPTARPAP 374
P P M PAA P P RP P
Sbjct: 33 PQKPVTTMRTPAATPAAPPTRPTP 56
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 445 PASPTMPMAKPAARPEKPTARPAP 374
P P M PAA P P RP P
Sbjct: 162 PQKPVTTMRTPAATPAAPPTRPTP 185
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEKPTARPAP 374
P P P P + AA PE P P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 445 PASPTMPMAKPAARPEKPTARPAP 374
PA P A PAA P+ A PAP
Sbjct: 507 PAPAPAPEAAPAAAPDAAPAEPAP 530
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 454 PRTPASPTMPMAKPAARPEKPTARPAPK*MNP 359
PR+P PM P+ + P P+P+ NP
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 185 HSQVRHRYCRHGGDAA*ADHEIHHSRCHGGYH 280
H H + H GD H +HH HG +H
Sbjct: 632 HHAPHHEHHEHHGDHHHGSHGVHHGH-HGTHH 662
>AL132898-10|CAC14416.2| 346|Caenorhabditis elegans Hypothetical
protein Y59A8B.21 protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +3
Query: 225 MRPEQIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAVGFSG 404
++PE + + +P + + IYG++ A+ + D P Y + FI +A+ FS
Sbjct: 148 LQPELLHR--VPALFTKLAVIYGIMQAMALIVVCDPPFRTYG--ESFIEDDMFMAMAFSI 203
Query: 405 LAAGFAIGIVG 437
+ AI +G
Sbjct: 204 ASVANAIARIG 214
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Frame = -3
Query: 460 AVPRTPASPTMPMA----KPAARPEKP 392
AVP TP +P P+A PA P+KP
Sbjct: 183 AVPATPKAPVAPVAPVIPAPAVTPQKP 209
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Frame = -3
Query: 460 AVPRTPASPTMPMA----KPAARPEKP 392
AVP TP +P P+A PA P+KP
Sbjct: 183 AVPATPKAPVAPVAPVIPAPAVTPQKP 209
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +3
Query: 237 QIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDQPSNNYTLYKGFIHLGAGLAV 392
++++ ++P + I+ + L + L+ G+++ S N+ L + IH+GA L +
Sbjct: 500 KMIRMMLPYLPHHILTVQDLNLNTLLHGAIN--SENFELVEFLIHMGAPLQI 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,640
Number of Sequences: 27780
Number of extensions: 351960
Number of successful extensions: 1236
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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