Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C10
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 219 1e-58
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 219 1e-58
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 73 3e-14
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 60 1e-10
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 33 0.014
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 33 0.014
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 32 0.033
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.71
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 1.2
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 1.6
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 1.6
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 2.2
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 26 2.2
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 2.2
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 2.9
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 2.9
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 26 2.9
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 25 3.8
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 25 5.0
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 25 5.0
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 24 8.7
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 219 bits (536), Expect = 1e-58
Identities = 103/143 (72%), Positives = 119/143 (83%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR E LYEGP DDE A+GI+ CD APLM+YVSKMVPTSD+GRFYAFGRVFSG V +
Sbjct: 348 AQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRS 407
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+G
Sbjct: 408 GLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSG 467
Query: 361 TITTFKNAHNMKVMKFSVSTVVR 429
T+TT + AHNMKVMKFSVS VV+
Sbjct: 468 TLTTSEVAHNMKVMKFSVSPVVQ 490
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 219 bits (536), Expect = 1e-58
Identities = 103/143 (72%), Positives = 119/143 (83%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR E LYEGP DDE A+GI+ CD APLM+YVSKMVPTSD+GRFYAFGRVFSG V +
Sbjct: 348 AQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRS 407
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLVGVDQFLVK+G
Sbjct: 408 GLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSG 467
Query: 361 TITTFKNAHNMKVMKFSVSTVVR 429
T+TT + AHNMKVMKFSVS VV+
Sbjct: 468 TLTTSEVAHNMKVMKFSVSPVVQ 490
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 72.5 bits (170), Expect = 3e-14
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 YEGPHDDEAALGIKTCDPE--APLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIM 201
Y GP + I E APL+M+V+K+ T D FYAF RV+SG+V GQK +++
Sbjct: 464 YIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVL 523
Query: 202 GPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 372
G N+ +ED+ I + RY ++ +G + L GVD + KT TI +
Sbjct: 524 GENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLGGVDNSISKTATIVS 580
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 60.5 bits (140), Expect = 1e-10
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 127 DKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEK-TIQRTILMMGRYVEAIEDV 303
DK F R++SG + GQ+ + GP + P E K T++ LMMG+ + +E V
Sbjct: 464 DKDILIGFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLETV 523
Query: 304 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSTVVR 429
P+GN+ + G+ +++T T+ + N N+ + + +VR
Sbjct: 524 PAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVR 565
Score = 29.1 bits (62), Expect = 0.31
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 43 DDEAALGIKTCDP--EAPLMMYVSKMVPTSDK 132
D + L +++CD E P+++Y+SKMV S++
Sbjct: 376 DPDITLAMESCDASKEQPVLVYISKMVAFSER 407
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.014
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 399 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 220
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 219 GLEVGAHDTGLLSGNDFT 166
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.014
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 399 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 220
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 219 GLEVGAHDTGLLSGNDFT 166
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 32.3 bits (70), Expect = 0.033
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -2
Query: 399 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 220
++ V V+ SDG L A V GG +LN + + +L G+L ++A
Sbjct: 81 DVDVNSVINDSDGPRLGLAFSGGGLRAMVHGGGVLNAFD-SRNGNGSSLAGILQSAMYIA 139
Query: 219 GLEVGAHDTGLLSGNDF 169
GL G+ G ++ N+F
Sbjct: 140 GLSGGSWLVGSVAVNNF 156
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 27.9 bits (59), Expect = 0.71
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = -2
Query: 408 KLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIF 229
+LHN+ C ++GSD S D+T + +G N L ++ H D ++ + ++
Sbjct: 12 QLHNIKTSCFIDGSDDQS--------DRTRSSSGDSTSNSLKLSHHISDELINAIYKELK 63
Query: 228 FLAG---LEVGAHDTGLL-SGNDFTGEHAPERVETALVRCRYH 112
+ H LL + ++ G+ +P + ++ R+H
Sbjct: 64 SPVSPWDKNISQHSPWLLEAASNSIGDSSPLLSPISPLKLRFH 106
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 146 RSGACSPVKSLPDRRPVSWAPTSSPARKKICMRRPSSVPSS--*WAVTWRPL 295
RSG+ S P+ PV+ PT P + R + SS +++W+PL
Sbjct: 1024 RSGSSSSGVPAPNLTPVNVPPTPPPRKSSASQRSGDLLASSPEESSISWKPL 1075
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 1.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 337 DQFLVKTGTITTFKNAHNMKVMKFSVSTVV 426
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.6 bits (56), Expect = 1.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 227 FLPGWKLGPMIRAFCPVTTL 168
FL GW L + AFC VT +
Sbjct: 1738 FLDGWSLPKTVLAFCAVTAI 1757
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.2 bits (55), Expect = 2.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 306 GHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGAHD 196
G+++NG V +HH+ L L+ Q A + VG +D
Sbjct: 573 GNVINGFIVRSHHDQLILKELMRQSNCHATVVVGKYD 609
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 202 GPNFQP-GKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVG 333
G +F P GK ++ + Q + + RY+ DVP+G+I G+ G
Sbjct: 115 GSDFDPKGKSDNEIRRFSQAFMRQLFRYIGPQTDVPAGDI-GVTG 158
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 2.2
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -2
Query: 381 VLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGA 202
VL +DG L + A +TG +N + +L G+L +L GL G+
Sbjct: 116 VLNDTDGPRLGIAISGGGFPAMLTGAGAINAFDAR-NGNTTSLGGILQSSMYLTGLSGGS 174
Query: 201 HDTGLLSGNDF 169
G ++ N+F
Sbjct: 175 WLVGSVAVNNF 185
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 2.9
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +2
Query: 155 ACSPVKSLPDRRPVSWAPTSS 217
A +PV+++ ++ P++W+P+S+
Sbjct: 91 ALTPVRNMSNKPPLTWSPSSA 111
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 175 VTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVE 288
V G + P+ +PG Y +T++R ++ YV+
Sbjct: 504 VLGSTEPVEPPSIEPGLPASAYSRTVERERFVLMAYVQ 541
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 2.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 31 EGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSD 129
+G H EA +K CDPE L + SK T++
Sbjct: 193 DGTHLAEA---LKKCDPETTLFLIASKTFTTAE 222
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.4 bits (53), Expect = 3.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 214 QPGKKEDLYEKTIQRTILMMGRYVEAIEDVPS 309
QP + +YE+T+ I+ + R ++A E +PS
Sbjct: 119 QPVELFAIYERTVPEPIMNLLRAMQAKESIPS 150
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 328 VGVDQFLVKTGTITTFKNAHNMKVM 402
+GVD F K G + +K+ N+K++
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLL 428
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 131 RAVSTRSGACSPVKSLPDRRPVSWAPTSSP 220
+++ST GACS + D ++W +P
Sbjct: 262 KSLSTAKGACSSPRLAKDGNHIAWLEMQTP 291
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = -2
Query: 426 HDGRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAH 271
H H H+ H MC+ ++ ++ EE + N HV+ H
Sbjct: 479 HGSHHHHSHSNHSMCLPNTTNDINIFEEFEEEKDNVEAQKMGYTNDDHVSQH 530
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,885,306
Number of Sequences: 5004
Number of extensions: 38927
Number of successful extensions: 123
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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