Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C10
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 194 3e-50
04_01_0103 + 1082077-1082167,1083037-1085477 192 1e-49
02_04_0017 + 18937774-18937864,18938505-18940945 192 1e-49
01_06_0662 + 30987187-30987277,30987825-30990214 191 2e-49
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 102 1e-22
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 81 3e-16
03_05_0511 + 25056018-25059107 56 1e-08
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 31 0.52
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 0.69
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 0.69
02_05_0363 - 28297295-28298167 30 0.69
12_01_0121 - 920988-921296,921556-921620,921874-921923,922009-92... 29 1.6
05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189 29 1.6
04_01_0410 - 5411135-5411581 29 2.1
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 2.1
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 2.1
01_06_0930 + 33134385-33138257 28 2.8
06_02_0334 + 14582925-14583404,14583533-14583540,14584070-145845... 28 3.7
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 3.7
05_03_0498 - 14720989-14722119,14722225-14722839 27 4.9
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 27 4.9
03_05_0060 + 20363857-20365359 27 4.9
09_03_0056 - 11936264-11939677 27 6.4
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 27 6.4
11_04_0148 - 14106513-14106599,14106787-14107014 27 8.5
05_04_0249 - 19365952-19366020,19366097-19366211,19366450-193665... 27 8.5
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 27 8.5
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 194 bits (472), Expect = 3e-50
Identities = 88/145 (60%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR++ LY+GP DD A I+ CDP+ PLM+YVSKM+P SDKGRF+AFGRVFSG V T
Sbjct: 348 AQQYRVDTLYDGPLDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGTVAT 407
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RIMGPNF PG+K+DLY KT+QRT++ MG+ E+++DVP GN +VG+DQF+ K
Sbjct: 408 GNKVRIMGPNFVPGEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFITKNA 467
Query: 361 TITTFK--NAHNMKVMKFSVSTVVR 429
T+T K +AH +K MKFSVS VVR
Sbjct: 468 TLTDEKAVDAHPIKAMKFSVSPVVR 492
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 192 bits (468), Expect = 1e-49
Identities = 88/145 (60%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+V T
Sbjct: 346 AQKYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVAT 405
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K
Sbjct: 406 GMKVRIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNA 465
Query: 361 TITTFKNAH--NMKVMKFSVSTVVR 429
T+T K A ++ MKFSVS VVR
Sbjct: 466 TLTNEKEADACPIRAMKFSVSPVVR 490
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 192 bits (467), Expect = 1e-49
Identities = 88/145 (60%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+V T
Sbjct: 346 AQRYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVAT 405
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+ K
Sbjct: 406 GMKVRIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFITKNA 465
Query: 361 TITTFK--NAHNMKVMKFSVSTVVR 429
T+T K +A ++ MKFSVS VVR
Sbjct: 466 TLTNEKESDACPIRAMKFSVSPVVR 490
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 191 bits (465), Expect = 2e-49
Identities = 89/145 (61%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
Frame = +1
Query: 1 ARGYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVT 180
A+ YR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRFYAFGRVFSG+V T
Sbjct: 342 AQRYRVENLYEGPLDDIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGRVAT 401
Query: 181 GQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 360
G K RIMGPN+ PG+K+DLY K +QRT++ MG+ E++E VP GN +VG+DQF+ K
Sbjct: 402 GMKVRIMGPNYAPGQKKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFITKNA 461
Query: 361 TITTFK--NAHNMKVMKFSVSTVVR 429
T+T K +A +K MKFSVS VVR
Sbjct: 462 TLTNEKEVDACPIKAMKFSVSPVVR 486
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 102 bits (244), Expect = 1e-22
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Frame = +1
Query: 13 RMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKA 192
++E +Y GP D +K CDP APLM+ V+K+ P SD F AFGRV+SG + TGQ
Sbjct: 472 KIEHIYTGPQDSTIVDAMKKCDPHAPLMVNVTKLYPKSDCSVFDAFGRVYSGTIQTGQTV 531
Query: 193 RIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 372
R++G + P +ED+ K + + + RY I P+G+ + GVD ++KT TI
Sbjct: 532 RVLGEGYSPDDEEDMTVKEVTKLWVYQARYRVPISKAPAGSWVLIEGVDASIMKTATICP 591
Query: 373 FK---NAHNMKVMKFSVSTVVR 429
K + + + ++F+ VV+
Sbjct: 592 MKMDEDVYIFRPLRFNTLPVVK 613
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/103 (37%), Positives = 62/103 (60%)
Frame = +1
Query: 64 IKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYE 243
++ CD E PL++YVSKM KGR++A GRVFSGKV +G + + P++ G+++DLY
Sbjct: 546 VRNCDAEGPLVLYVSKMTLALGKGRYFALGRVFSGKVTSGMNVQFLSPSYGIGERKDLYI 605
Query: 244 KTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITT 372
K I+ +++ +G E +E G+ C + + L T TT
Sbjct: 606 KCIKSSLIWIGDKRELVE----GSSCSSIPGHRDLFDKATYTT 644
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Frame = +1
Query: 139 FYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLY----EKTIQRTILMMGRYVEAIEDVP 306
F AF RVF G + GQK ++ P + P K E + E +Q M+G+ + + V
Sbjct: 439 FMAFARVFCGVLRAGQKVFVLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVC 498
Query: 307 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSTVVR 429
+GN+ + G+ ++K+ T+++ KN M F VS +++
Sbjct: 499 AGNVVAIQGLGHHILKSATLSSTKNCWPFSSMMFQVSPMLK 539
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 161 SPVKSLPDRRPVSWAPTSSPARKKICMRRPSSVPSS 268
SPV + P R S P++SPAR + +RRPS++ ++
Sbjct: 11 SPVATAPTARARS-TPSASPARPSLRLRRPSTLAAA 45
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 30.3 bits (65), Expect = 0.69
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 55 ALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 198
+L + + D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 30.3 bits (65), Expect = 0.69
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 55 ALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 198
+L + + D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 0.69
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 200 WAPTSSPARKKICMRRPSSVPSS*WAVTWRPL 295
W P+ SP R+ C RR +S S +AV PL
Sbjct: 206 WQPSPSPMRRTPCRRRQTSTMPSGFAVCLSPL 237
>12_01_0121 -
920988-921296,921556-921620,921874-921923,922009-922106,
923832-923867,925351-925731,925839-926324,926471-926647
Length = 533
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 128 TRAVSTRSGACSPVKSLPDRRPVSWAPTSSPARKKI 235
T+ + C+P+KS+ + + W P SS +R+ +
Sbjct: 484 TKGTKSMDHPCNPIKSMGNLGSMGWPPLSSESRRML 519
>05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189
Length = 269
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 119 RHRTRAVSTRSGACSPVKSLPDRRPVSWAPTS 214
RHR R V T S + S + P P W P S
Sbjct: 29 RHRRRRVQTLSSSSSDAAAAPSTPPPVWPPAS 60
>04_01_0410 - 5411135-5411581
Length = 148
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 146 RSGACSPVKSLPDRRPVSWAPTSSPARKKICMRRPSS 256
R+ SP+ + +P P+S+ KK+C ++P +
Sbjct: 98 RTSVKSPIPAKKSEQPAQKKPSSAQKSKKVCRKKPKT 134
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 155 ACSPVKSLPDRRPVSWAPTSSP 220
A S + P RRP SWAP+ +P
Sbjct: 255 AASSAPAFPPRRPNSWAPSPAP 276
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 217 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGV--DQFLVKTGTITTFK 378
P + EDL Y+ + + L+ G Y E +E N CG+ + + + + T +
Sbjct: 959 PSQLEDLTIEGYKSAMYPSWLLDGSYFENLESFTLANCCGIGSLPPNTEIFRHCLTLTLE 1018
Query: 379 NAHNMKVMKF 408
N NMK + F
Sbjct: 1019 NVPNMKTLSF 1028
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 217 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFK 378
P + EDL Y+ T+ + L+ G Y E +E N C G + + + + T +
Sbjct: 777 PSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLE 836
Query: 379 NAHNMKVMKF 408
N NMK + F
Sbjct: 837 NVPNMKTLPF 846
>06_02_0334 +
14582925-14583404,14583533-14583540,14584070-14584561,
14584733-14585087,14585338-14585505
Length = 500
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 146 RSGACSPVKSLPDRRPVSWAPTSSPARKKI-CMRRPS 253
R+ SP+ + +P P+S+P KK+ CMRR S
Sbjct: 132 RTPVKSPIPAKKSEQPALKKPSSAPKSKKVNCMRRLS 168
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -2
Query: 219 GLEVGAHDTGLLSGNDFTGEHAPERVETALVRCRYHFAHVHHERCFGITSLDT 61
GLEV A G + + F H P + E +V A +HH G+T LDT
Sbjct: 20 GLEVSAQGLGCMGMSAF---HGPSKPEADMV------ALIHHAVAAGVTLLDT 63
>05_03_0498 - 14720989-14722119,14722225-14722839
Length = 581
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 351 DEELIDADQTANVTGGHILNGLHVTAHHEDGTLDG 247
D L+DAD T N G ++N GT+DG
Sbjct: 504 DASLVDADGTVNEAGQRLVNLRREWTSDARGTIDG 538
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 219 GLEVGAHDTGLLSGNDFTGEHAPERVETALVRCRYHFAHVHHERCFGITSLDT 61
GLEV A G + + F G PE AL+ HH G+T LDT
Sbjct: 20 GLEVSAQGLGCMGMSAFYGPPKPEADMVALI---------HHAVAAGVTHLDT 63
>03_05_0060 + 20363857-20365359
Length = 500
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 324 TANVTGGHILNGLHVTAHHEDGTLDGLL 241
+AN TG ++G+H HH G ++G L
Sbjct: 240 SANQTGNSFVDGIHGENHHSIGEVNGNL 267
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 27.1 bits (57), Expect = 6.4
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 134 AVSTRSGACS-PVKSLPDR--RPVSWA-PTSSPARKKICMRR-PSSVPSS*WAVTWRP 292
A + RS A P SLP RP++ PT+S + R PS++P S VTW P
Sbjct: 102 ASALRSAAAGDPASSLPPYLLRPIAQKLPTASAQNSTMQQTRDPSALPHSSSFVTWTP 159
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 405 LHNLHVMCVLEGSDGTSLDEELIDAD-QTANVTGGHILNGL 286
LHN + + G+ TSLD +L++ VTGG ++G+
Sbjct: 567 LHNGNTVFTWTGNLTTSLDNDLVERQLDVIKVTGGTTISGV 607
>11_04_0148 - 14106513-14106599,14106787-14107014
Length = 104
Score = 26.6 bits (56), Expect = 8.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 342 VPRQDWYHH 368
VP QDWYHH
Sbjct: 53 VPEQDWYHH 61
>05_04_0249 -
19365952-19366020,19366097-19366211,19366450-19366520,
19366759-19366797,19367156-19367238,19367366-19367438,
19367826-19367884,19368457-19368511
Length = 187
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 79 PEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKK 228
P+ P+++Y K T +G+ + F +F+G+ + GP+ G K
Sbjct: 139 PQFPILVYF-KETQTKPEGQIHFFPVIFNGRQLYDAMVERAGPSETSGPK 187
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 219 GLEVGAHDTGLLSGNDFTGEHAPERVETALVRCRYHFAHVHHERCFGITSLDT 61
GLEV A G + + F G PE AL+ HH G+T LDT
Sbjct: 20 GLEVSAQGLGCMGMSAFYGPPKPEPDMVALI---------HHAVAAGVTLLDT 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,208,239
Number of Sequences: 37544
Number of extensions: 298694
Number of successful extensions: 972
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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