Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_C08
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    71   3e-14
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    25   2.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   4.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 70.5 bits (165), Expect = 3e-14
 Identities = 34/75 (45%), Positives = 48/75 (64%)
 Frame = +3

Query: 45  LQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 224
           L+EI    +P   T++FVETKR A+ +   +    +P   +HGD+ Q+ER+  LY FK G
Sbjct: 414 LEEILNGGNPKG-TLVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSG 472

Query: 225 RSSILVATDVAARGL 269
           R  +L+AT VAARGL
Sbjct: 473 RMDVLIATSVAARGL 487


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 231 WNDPL*IGIILHPFLAVFCHRACTQ 157
           WN     G++L   LA  CH AC +
Sbjct: 2   WNSITASGLMLVAALATLCHGACDE 26


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 369 ESYCVLFDYCLNLKGMLLIW 428
           E YC LF Y   +   L +W
Sbjct: 108 EPYCQLFTYTSGVSSFLSVW 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,915
Number of Sequences: 2352
Number of extensions: 11274
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)