Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C06
(524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0518 + 4057428-4057538,4059609-4059801,4059921-4060025,406... 119 1e-27
02_04_0195 + 20830849-20830950,20831498-20831690,20831800-208319... 117 7e-27
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 116 1e-26
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 110 6e-25
12_01_0486 + 3854889-3855014,3855897-3856089,3856206-3856310,385... 107 5e-24
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 103 7e-23
09_06_0252 + 21867179-21867283,21868362-21868526,21868621-218687... 48 5e-06
08_02_1543 + 27783063-27783182,27784321-27784485,27784577-277846... 46 2e-05
06_03_0947 + 26248378-26248494,26248600-26248764,26248843-262489... 45 4e-05
08_02_1132 - 24530921-24532906 44 1e-04
02_05_0564 + 30003817-30005778 41 7e-04
08_02_0035 + 11453171-11455186 39 0.003
02_05_1082 - 33976038-33978035 36 0.015
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878... 36 0.020
05_01_0486 - 4047055-4049013 35 0.046
05_03_0255 + 11100083-11100158,11100244-11100391,11101372-111015... 33 0.19
07_01_0777 + 6004370-6004559,6005089-6005207,6005411-6005538,600... 28 4.0
10_08_0494 - 18308105-18309490 28 5.3
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819... 28 5.3
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 27 7.0
11_01_0295 + 2217496-2218092,2218774-2218876,2219140-2219249,221... 27 9.2
10_01_0251 + 2641320-2643272 27 9.2
10_01_0246 + 2571524-2571689,2573127-2573169,2573310-2575308 27 9.2
>11_01_0518 +
4057428-4057538,4059609-4059801,4059921-4060025,
4060259-4060347,4060424-4060576,4060754-4060888,
4061241-4061407,4062129-4062223,4062367-4062740,
4062903-4063176,4063806-4063822
Length = 570
Score = 119 bits (287), Expect = 1e-27
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Frame = +3
Query: 75 IVNCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEAL 254
+ + E H YK E V LW+N VGPY+N QETY Y+SLPFC ++ H L E L
Sbjct: 28 LASASESDHKYKAEETVKLWVNKVGPYNNPQETYNYYSLPFCQPSE-NPAHKWGGLGEVL 86
Query: 255 QGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDDLPIWGTVG 434
G EL S +DI F NV C IEL++ + A++ YW++++I G VG
Sbjct: 87 GGNELIDSQVDIKFLKNVEKGPICTIELDDNKIQQFTDAIERSYWFELFI------GFVG 140
Query: 435 EIDGDH---YYIWTHKKFDIGYNGNRIVEVHLT 524
E D ++ +Y++THK + YNGNRI+ V+LT
Sbjct: 141 ETDKNNENKHYLYTHKNIVVKYNGNRIIHVNLT 173
>02_04_0195 +
20830849-20830950,20831498-20831690,20831800-20831904,
20832147-20832235,20832316-20832468,20832628-20832762,
20832849-20833015,20833519-20833613,20833707-20834080,
20834177-20834599
Length = 611
Score = 117 bits (281), Expect = 7e-27
Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Frame = +3
Query: 54 LLFIFCT-IVNCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHY 230
LL +F + + H Y+ E+V+LW+N VGPY+N QETY Y+SLPFC + + H
Sbjct: 17 LLVVFLAPLAAASDSDHKYQSEEKVMLWVNKVGPYNNPQETYNYYSLPFCHPSNNPV-HK 75
Query: 231 HETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDD 410
L E L G EL S +DI F +V C+IEL+ K L A+++ YW++ +I
Sbjct: 76 WGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDPDKAKQLSDAIESSYWFEFFI-- 133
Query: 411 LPIWGTVGEID---GDHYYIWTHKKFDIGYNGNRIVEVHLT 524
G VGE D + Y+++THK I YNGN+I+ V+LT
Sbjct: 134 ----GFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVNLT 170
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 116 bits (279), Expect = 1e-26
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Frame = +3
Query: 54 LLFIFCTIVNCDE-HTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHY 230
LL +V C +H Y+ G+ V L+ N VGP+HN ETY YF LPFC KV
Sbjct: 6 LLLGLVMLVGCAAADSHRYRPGDAVPLYANKVGPFHNPSETYRYFDLPFCAPEKVK--DK 63
Query: 231 HETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDD 410
E L E L G L + + F+ + A+ C+ L++ +AV Y++QMY DD
Sbjct: 64 IEALGEVLNGDRLVDAPYKLDFRVDFDAKSVCSRRLSKDDVVKFRHAVSKDYYFQMYYDD 123
Query: 411 LPIWGTVG----EID-GDHYYIWTHKKFDIGYNGNRIVEVHL 521
LP WG +G + D GD YY++ H FDI YN +R++E+++
Sbjct: 124 LPFWGFIGTKPEKADAGDKYYLYRHIIFDILYNKDRVIEINV 165
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 110 bits (265), Expect = 6e-25
Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Frame = +3
Query: 72 TIVNCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEA 251
T V D H YK E V L+ N VGP+HN ETY YF LPFC KV E L E
Sbjct: 23 TGVVADGSDHRYKANELVPLYANKVGPFHNPSETYRYFDLPFCSPEKVK--EKSEALGEV 80
Query: 252 LQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDDLPIWGTV 431
L G L + + F+ + ++ C+ +L ++ AV Y++QMY DDLP+WG +
Sbjct: 81 LNGDRLVDAPYKLDFRVDYDSKPVCSKKLTKEEVAKFRNAVAKDYYFQMYYDDLPLWGFI 140
Query: 432 GEIDGD--------HYYIWTHKKFDIGYNGNRIVEVHL 521
G+++ YY++ H FDI YN +R++E+++
Sbjct: 141 GKVEKGGKTDPKEWKYYLYRHIIFDILYNNDRVIEINV 178
>12_01_0486 +
3854889-3855014,3855897-3856089,3856206-3856310,
3856541-3856629,3856720-3856872,3857047-3857181,
3857293-3857459,3858193-3858287,3858495-3858868,
3859101-3859374,3859464-3859531
Length = 592
Score = 107 bits (257), Expect = 5e-24
Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Frame = +3
Query: 81 NCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQG 260
+ E H YK E V LW+N VGPY+N QETY Y SLPFC ++ H L E L G
Sbjct: 35 SASESDHKYKVEEPVKLWVNKVGPYNNPQETYNYHSLPFCQPSE-NPAHKWGGLGEVLGG 93
Query: 261 VELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDDLPIWGTVGEI 440
EL S +DI F N C +EL+ + + A+ N YW++ ++ G VGE
Sbjct: 94 NELIDSQIDIKFLRNEERGSICTLELDSKKVQQFSDAIDNSYWFEFFM------GFVGET 147
Query: 441 DGDH---YYIWTHKKFDIGYNGNRIVEVHLT 524
D ++ Y++THK + YN NRI+ V+LT
Sbjct: 148 DKNNENKRYLYTHKSILVKYNDNRIIHVNLT 178
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 103 bits (248), Expect = 7e-23
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Frame = +3
Query: 54 LLFIFCTI-VNCDEHTHSYKDGEQVVLWMNTVGPYHNRQ------------ETYAYFSLP 194
++ + C + D H YKDG+ V L+ N VGP+HN ETY Y+ LP
Sbjct: 15 VVVLACVLGARADGSDHRYKDGDYVPLYANKVGPFHNPSSLLIELPTVYCSETYRYYDLP 74
Query: 195 FCVGTKVTIGHYHETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAV 374
FC E L E L G L + ++ FK++ ++ C L++ L AV
Sbjct: 75 FCAPDHPK--DKREALGEVLNGDRLVDAPYELNFKEDRNSKVLCQKSLSKVEVAKLRDAV 132
Query: 375 KNHYWYQMYIDDLPIWGTVGEIDGD------HYYIWTHKKFDIGYNGNRIVEVHL 521
Y++QMY DDLP+WG +G++D D Y ++ H FDI YNG+R++E+++
Sbjct: 133 AKDYYFQMYYDDLPLWGFLGKLDKDKEQGNAKYLLFKHIHFDIMYNGDRVIEINV 187
>09_06_0252 +
21867179-21867283,21868362-21868526,21868621-21868730,
21868802-21868904,21868998-21869110,21869204-21869357,
21869476-21870633
Length = 635
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +3
Query: 165 QETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNE 344
Q YAY+SLPFC TI E L E L+G +E S ++ Q C + + E
Sbjct: 52 QLPYAYYSLPFC--KPETIVDSAENLGEVLRGDRIENSPYVFQMREPKMCQIVCKLTVGE 109
Query: 345 QSYKALVYAVKNHYWYQMYIDDLPI 419
+ K L +++ Y M +D+LP+
Sbjct: 110 KEAKELKEKIEDEYRVNMILDNLPL 134
>08_02_1543 +
27783063-27783182,27784321-27784485,27784577-27784686,
27784771-27784876,27784952-27785050,27785450-27786607
Length = 585
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/95 (29%), Positives = 45/95 (47%)
Frame = +3
Query: 165 QETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNE 344
Q Y+Y+SLPFC TI E L E L+G +E S ++ Q C +++
Sbjct: 57 QLPYSYYSLPFC--KPDTIVDSAENLGEVLRGDRIENSPYVFEMREPKMCQIVCKATISD 114
Query: 345 QSYKALVYAVKNHYWYQMYIDDLPIWGTVGEIDGD 449
+ K L +++ Y M +D+LP+ + D D
Sbjct: 115 KQAKELKEKIEDEYRVNMILDNLPLVVPIARPDRD 149
>06_03_0947 +
26248378-26248494,26248600-26248764,26248843-26248952,
26249065-26249179,26249310-26249408,26249485-26249694,
26249802-26250965
Length = 659
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/116 (26%), Positives = 51/116 (43%)
Frame = +3
Query: 105 YKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGL 284
++ +Q+ + +N + Q Y+Y+SLPFC TI E L E L+G +E S
Sbjct: 37 FRKKDQLAVKVNQLSSIKT-QLPYSYYSLPFC--RPATIVDSAENLGEVLRGDRIENSLY 93
Query: 285 DITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDDLPIWGTVGEIDGDH 452
++ Q C L Q K + + Y M +D+LP+ + + DH
Sbjct: 94 VFEMREPRLCQIVCKTALTHQEAKDFREKIDDEYRINMILDNLPLVVPIRSLLDDH 149
>08_02_1132 - 24530921-24532906
Length = 661
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +3
Query: 93 HTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELE 272
+ H+Y GE++ +N++ ++Y+SLP+C + I E L E L G +++
Sbjct: 35 YMHTYSQGEEIWAKVNSLTSIETEMP-FSYYSLPYC-RPQGGIKKSAENLGELLMGDQID 92
Query: 273 FSGLDITFKDNVPAQQF-CAIE-LNEQSYKALVYAVKNHYWYQMYIDDLPI 419
S F+ NV + C + LNE K L ++ Y M +D+LP+
Sbjct: 93 NS--PYRFRVNVNESLYLCTTKGLNENDAKLLKQRTRDLYQVNMMLDNLPV 141
>02_05_0564 + 30003817-30005778
Length = 653
Score = 40.7 bits (91), Expect = 7e-04
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 93 HTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELE 272
+ H+Y+ GE++ +N++ + ++Y+SLP+C + I E L E L G +++
Sbjct: 30 YMHTYRQGEEIWAKVNSLTSIET-ELPFSYYSLPYC-HPQGGIKKSAENLGELLMGDQID 87
Query: 273 FSGLDITFKDNVPAQQF-CAIE-LNEQSYKALVYAVKNHYWYQMYIDDLPI 419
S F+ NV + C L+E K L ++ Y M +D+LP+
Sbjct: 88 NS--PYRFRVNVNESLYLCTTNPLDEADVKLLKQRSRDLYQVNMILDNLPV 136
>08_02_0035 + 11453171-11455186
Length = 671
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/109 (23%), Positives = 49/109 (44%)
Frame = +3
Query: 93 HTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELE 272
+ H Y+ GE + +N++ ++ + Y+SLPFC + + E+L E L G +E
Sbjct: 37 YPHRYRPGEALAAKVNSLTSPSSKLP-FPYYSLPFC-APQGGVNRAAESLGELLLGDRIE 94
Query: 273 FSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDDLPI 419
S + N A L + L++ + + Y + +D LP+
Sbjct: 95 TSPYRFSMLKNATAFLCRTDPLPPATADLLMFRIDDAYHVNLLLDTLPV 143
>02_05_1082 - 33976038-33978035
Length = 665
Score = 36.3 bits (80), Expect = 0.015
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +3
Query: 93 HTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELE 272
+ H Y GE + + +N++ + + Y+Y+SLPFC + E L E L G +E
Sbjct: 34 YPHKYNPGEPLSVKVNSLTSI-DTEIPYSYYSLPFCTPPD-GVKDSAENLGELLMGDRIE 91
Query: 273 FSGLDITFKDNVPAQQFC-AIELNEQSYKALVYAVKNHYWYQMYIDDLPIWGTVGEIDGD 449
S N C + L ++ L + Y + +D+LP + D
Sbjct: 92 NSPYRFRMHANDSDLFLCRSPPLAADAFNLLKKRIDEMYQVNLILDNLP---AIRYTKKD 148
Query: 450 HYYI-WT 467
Y++ WT
Sbjct: 149 DYFLRWT 155
>08_02_1544 +
27787089-27787172,27787448-27787612,27787741-27787850,
27788360-27788513,27788643-27788937,27788996-27789798
Length = 536
Score = 35.9 bits (79), Expect = 0.020
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +3
Query: 114 GEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDIT 293
G++V++ MN + Q TY+Y+SLPFC +T TL + L G + S
Sbjct: 29 GDEVLVKMNELMSIET-QITYSYYSLPFCRPDNLT--ESAPTLWQLLHGDRQQRSPYQFE 85
Query: 294 FKDNVPAQQFCAIELNEQSYKALVYAVKNHY 386
+ Q C + + E+ K L +++ Y
Sbjct: 86 MRVPKKCQIVCRVLVGEKEAKELTEKMEDEY 116
>05_01_0486 - 4047055-4049013
Length = 652
Score = 34.7 bits (76), Expect = 0.046
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +3
Query: 99 HSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFS 278
H+Y E + +N++ + ++Y+SLP+C + + E L E L G +++ S
Sbjct: 33 HTYTPNEVISAKVNSLTSIET-ELPFSYYSLPYCKPPE-GVKKSAENLGEILMGDQIDNS 90
Query: 279 GLDITFKDNVPAQQF-CAIE-LNEQSYKALVYAVKNHYWYQMYIDDLPIWGTVGEIDGDH 452
F+ NV + C + L ++ + L ++ Y M +D+LP+ E +G
Sbjct: 91 --PYRFRVNVNESVYLCTTDPLTKEQAELLKKRARDLYQVNMILDNLPVM-RFTEQNGVT 147
Query: 453 YYIWTHKKFDIGYN 494
WT F +GYN
Sbjct: 148 IQ-WT--GFPVGYN 158
>05_03_0255 +
11100083-11100158,11100244-11100391,11101372-11101559,
11101648-11101819,11102637-11102839,11103640-11103762,
11103838-11103941,11105579-11105713
Length = 382
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 486 RCQISCESRCNNDRHLFHLRYPI*ANHLCTFDTNSDS*QHK 364
R Q+SC S+ L R P +N +C +DT S S H+
Sbjct: 133 RAQVSCNSKSTGTSFLREYRVPRNSNSICIYDTRSLSNNHE 173
>07_01_0777 +
6004370-6004559,6005089-6005207,6005411-6005538,
6005645-6005749,6007156-6008650
Length = 678
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 202 WEQKLL*DIITKHYRKRFKESNWNSVVSTLRSKIMCRLNNFVP 330
W QK +I Y+ ++ E+ W +VVS L KI LN P
Sbjct: 565 WIQKYCHNI--NRYKVKYIEATWATVVSCLDKKISISLNFLQP 605
>10_08_0494 - 18308105-18309490
Length = 461
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 170 LLTIVIWAYGIHPQHHLFTIFI 105
LL +++W GI P HH+F I I
Sbjct: 354 LLDLMVWN-GIQPNHHVFNILI 374
>05_05_0127 -
22580720-22580808,22580936-22580987,22581703-22581908,
22582019-22582152,22582239-22582369,22583333-22583392,
22583615-22583755,22583880-22584347,22584524-22584686,
22585373-22585476,22585755-22585853,22586177-22586281,
22586516-22586596,22587168-22587986,22588497-22588553
Length = 902
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -1
Query: 422 PYRQIIYVHLIPIVILNSINQGLVGLLI 339
P + +VH++P++ LN + Q + G+++
Sbjct: 867 PENAVAHVHIVPVMELNEMEQQMKGIML 894
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 72 TIVNCDEHTHSYKDGEQ 122
TIVNC+E HS KD E+
Sbjct: 215 TIVNCEEPEHSTKDTEE 231
>11_01_0295 +
2217496-2218092,2218774-2218876,2219140-2219249,
2219328-2219399,2219653-2219814,2220300-2220510,
2220613-2220948,2221050-2221162
Length = 567
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 172 RMHIFHYHFVWEQKLL*DIITKHYRKRFKESNWNSVVSTLRSKIM 306
R+ I YH + E+ L + Y+K KES NS++S ++++M
Sbjct: 245 RILIDFYHKLREESLT---VISQYKKDLKESQKNSMLSDEKNEVM 286
>10_01_0251 + 2641320-2643272
Length = 650
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 139 FIHSTTCSPSLYECVCSSQLTIVQKINSKYKNFIINSLVALD*T 8
++HS CSP L+ V S + + N+K +F I+ L++ D T
Sbjct: 146 YMHSM-CSPVLHGDVKPSNILLDDSFNAKISDFGISRLLSTDKT 188
>10_01_0246 + 2571524-2571689,2573127-2573169,2573310-2575308
Length = 735
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 139 FIHSTTCSPSLYECVCSSQLTIVQKINSKYKNFIINSLVALD*T 8
++HS CSP L+ V S + + N+K +F I+ L++ D T
Sbjct: 231 YLHSM-CSPVLHGDVKPSNILLDDNFNAKITDFGISRLLSTDKT 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,451,489
Number of Sequences: 37544
Number of extensions: 302343
Number of successful extensions: 727
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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