Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C06
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical ... 212 1e-55
Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 6.2
AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm rece... 27 6.2
>AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical
protein Y41D4A.4 protein.
Length = 580
Score = 212 bits (518), Expect = 1e-55
Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Frame = +3
Query: 39 MKFLYLLFIFCTI-VNCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKV 215
M+ L L +F ++ V DEH H Y+ E+VVLWMNTVGPY NRQETY YFSLPFC G K
Sbjct: 1 MRVLISLLLFTSLLVEADEHDHLYEVDEEVVLWMNTVGPYSNRQETYTYFSLPFCKGEKK 60
Query: 216 TIGHYHETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQ 395
IGHYHET+ E+L GVELEFSGLDI F+ N C +L E YK L+YA++N Y+YQ
Sbjct: 61 EIGHYHETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKKLTETDYKTLLYAIQNSYYYQ 120
Query: 396 MYIDDLPIWGTVGEIDG----DHYYIWTHKKFDIGYNGNRIVEVHLT 524
MY+DD+PIWG VGEID Y ++THK+ DIGYN ++V+V+LT
Sbjct: 121 MYLDDMPIWGMVGEIDNTVNPPAYKLYTHKRLDIGYNDKQVVDVNLT 167
>Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical
protein ZK858.6 protein.
Length = 619
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +3
Query: 174 YAYFSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSY 353
+ Y+S+PFC I + E L E ++G + + K N C+ +L++++
Sbjct: 54 FEYYSVPFCKPANGDIQYKSENLGEVMRGDRIVNTPYAFHMKKNEQCVSVCSNKLSKENV 113
Query: 354 KALVYAVKNHYWYQMYIDDLPIWGTVGEI-DGDHYYIWTHKKFDIGYNGNRIVEVHL 521
++ Y + +D+LP+ + GD YY ++ IG N + HL
Sbjct: 114 ALFKERIRQEYSAHLIVDNLPVATVINPAQSGDVYYDLGYRLGWIGDNAKVFLNNHL 170
>Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical
protein C41G6.3 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -1
Query: 368 INQGLVGL--LIEFNGTKLLSRHIIFERNVETTEFQFDSLKRF 246
+++GL G L+ +N TK+ +++ FE V T+EF LK F
Sbjct: 288 LSEGLSGFNALLMYNITKIQRKYLEFENAVLTSEFPIAVLKTF 330
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +3
Query: 237 TLSEALQGVELEFSGLDITFKDNVPAQQFCAIELNEQSYKALVYAVKNHYWYQMYIDD 410
TL LQG+ ++ G I+FK+ A + A +LN A ++ Y ++ ++++
Sbjct: 301 TLQSLLQGIYVDSFGFRISFKEEPNALHYMATKLNHFYANRSKSASEHKYNWKRFLEE 358
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 141 TVGPYHNRQETYAYFSLPFCVGTKVTIG---HYHETLSEALQGVELEFSGLDITFKDNVP 311
T+GP +++ + + VG + + HYHE + + + F GL ++D +
Sbjct: 297 TIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIAEVLTQMFKGLQQNYQDEIA 356
Query: 312 A 314
A
Sbjct: 357 A 357
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 153 YHNRQETYAYFSLPFCVGTKVTIGHYHETLSE---ALQGVELEFSGLD 287
Y+N +E Y SL G + GH+ +L+ A Q LE+SG D
Sbjct: 803 YNNMKEDDNYLSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSD 850
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 153 YHNRQETYAYFSLPFCVGTKVTIGHYHETLSE---ALQGVELEFSGLD 287
Y+N +E Y SL G + GH+ +L+ A Q LE+SG D
Sbjct: 803 YNNMKEDDNYLSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSD 850
>AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm
receptor protein 85 protein.
Length = 340
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 36 IMKFLYLLFIFCTIVNCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLP 194
++ L + FI+ IV CD Y DG ++ W+ T YF+ P
Sbjct: 99 LITLLVVHFIYRYIVICDSAKLKYFDGGYLLCWVFGCAACGISMVTVKYFAFP 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,206,965
Number of Sequences: 27780
Number of extensions: 296558
Number of successful extensions: 752
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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