Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_C06
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    25   0.63 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.63 
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   1.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 192 PFCVGTKV-TIGHYHETLSEALQGVELEFSGLDITFKD 302
           P  + T+V ++  +HE L+EAL G  + F+  +I+ K+
Sbjct: 282 PAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKE 319


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 236 FVIMSYSNFCSHTKW**KICIRLLTIVIWA-YGIHP 132
           FV+  +S FCS   W  KI    +T + W   G++P
Sbjct: 352 FVVNLWSGFCSQCIWQEKIVFAAVTWLGWINSGMNP 387


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 228 YHETLSEALQGVELEFSGLDITFKD 302
           +HE L+EAL G  + F+  +I+ K+
Sbjct: 6   HHEALTEALPGDNVGFNVKNISVKE 30


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 458 VIMIAIYFTYGTPY 417
           VI+IA++F   TPY
Sbjct: 263 VIIIAVFFICWTPY 276


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 399 YIDDLPIWGTVGEID 443
           Y D  PI+GT+ ++D
Sbjct: 89  YTDVHPIFGTISDLD 103


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 399 YIDDLPIWGTVGEID 443
           Y D  PI+GT+ ++D
Sbjct: 89  YTDVHPIFGTISDLD 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,406
Number of Sequences: 438
Number of extensions: 4048
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)