Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C04
(504 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p pro... 108 4e-24
AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,... 108 4e-24
BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p pro... 105 4e-23
AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,... 105 4e-23
AE013599-2849|AAF57585.1| 341|Drosophila melanogaster CG10474-P... 94 8e-20
AE013599-3287|AAF46769.2| 397|Drosophila melanogaster CG4372-PA... 72 5e-13
AY061074-1|AAL28622.1| 365|Drosophila melanogaster LD05057p pro... 56 2e-08
AE014296-2628|AAF49544.2| 365|Drosophila melanogaster CG5241-PA... 56 2e-08
AY061292-1|AAL28840.1| 332|Drosophila melanogaster LD20519p pro... 46 2e-05
AE014298-2171|AAF48471.1| 332|Drosophila melanogaster CG7860-PA... 46 2e-05
AE014296-3022|AAN11678.1| 136|Drosophila melanogaster CG32198-P... 31 0.67
>AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p
protein.
Length = 393
Score = 108 bits (260), Expect = 4e-24
Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +3
Query: 240 IPIVITTWSFTNSTQRAWGVIESGNSAL----DAIEQGATVCEVEQCDGTVGYGGSPDED 407
+P+VI TW+FT + AW +++ L +A+ +G + CE QCD TVGYGGSPDE
Sbjct: 56 LPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDEL 115
Query: 408 GETTLDALIMDGKTMNVGAVGALRRIKNAISV 503
GETTLDA++MDG TM+VGAV LRRIK+AI V
Sbjct: 116 GETTLDAMVMDGATMDVGAVAGLRRIKDAIKV 147
>AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,
isoform A protein.
Length = 393
Score = 108 bits (260), Expect = 4e-24
Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +3
Query: 240 IPIVITTWSFTNSTQRAWGVIESGNSAL----DAIEQGATVCEVEQCDGTVGYGGSPDED 407
+P+VI TW+FT + AW +++ L +A+ +G + CE QCD TVGYGGSPDE
Sbjct: 56 LPMVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDEL 115
Query: 408 GETTLDALIMDGKTMNVGAVGALRRIKNAISV 503
GETTLDA++MDG TM+VGAV LRRIK+AI V
Sbjct: 116 GETTLDAMVMDGATMDVGAVAGLRRIKDAIKV 147
>BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p
protein.
Length = 336
Score = 105 bits (251), Expect = 4e-23
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Frame = +3
Query: 246 IVITTWSFTNSTQRAWGVIESGNSAL----DAIEQGATVCEVEQCDGTVGYGGSPDEDGE 413
+VI TW+FT + AW +++ L +A+ +G + CE QCD TVGYGGSPDE GE
Sbjct: 1 MVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDELGE 60
Query: 414 TTLDALIMDGKTMNVGAVGALRRIKNAISV 503
TTLDA++MDG TM+VGAV LRRIK+AI V
Sbjct: 61 TTLDAMVMDGATMDVGAVAGLRRIKDAIKV 90
>AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,
isoform B protein.
Length = 336
Score = 105 bits (251), Expect = 4e-23
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Frame = +3
Query: 246 IVITTWSFTNSTQRAWGVIESGNSAL----DAIEQGATVCEVEQCDGTVGYGGSPDEDGE 413
+VI TW+FT + AW +++ L +A+ +G + CE QCD TVGYGGSPDE GE
Sbjct: 1 MVINTWNFTAANVLAWRILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGSPDELGE 60
Query: 414 TTLDALIMDGKTMNVGAVGALRRIKNAISV 503
TTLDA++MDG TM+VGAV LRRIK+AI V
Sbjct: 61 TTLDAMVMDGATMDVGAVAGLRRIKDAIKV 90
>AE013599-2849|AAF57585.1| 341|Drosophila melanogaster CG10474-PA
protein.
Length = 341
Score = 94.3 bits (224), Expect = 8e-20
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +3
Query: 246 IVITTWSFTNSTQRAWGVIESGNSAL----DAIEQGATVCEVEQCDGTVGYGGSPDEDGE 413
+VI TW F + + AW ++ L A+ G ++CE QC TVGYGG+PDE G+
Sbjct: 1 MVINTWPFAEAKKEAWRLLNVKKGGLGQTRSAVVGGISMCEKLQCAKTVGYGGNPDERGD 60
Query: 414 TTLDALIMDGKTMNVGAVGALRRIKNAISV 503
T+LDAL+MDG TM VGAVG LRRI++AI V
Sbjct: 61 TSLDALLMDGGTMEVGAVGDLRRIRSAIKV 90
>AE013599-3287|AAF46769.2| 397|Drosophila melanogaster CG4372-PA
protein.
Length = 397
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 246 IVITTWSFTNSTQRAWGVIESG-NSALDAIEQGATVCEVEQCDGTVGYGGSPDEDGETTL 422
++I+TW++T++ +AW V++ G A+ QG C+ ++C + SPD +G TL
Sbjct: 54 LLISTWNYTDANLQAWSVLQQGPRRTRQAVIQGCMACQNQRCGRLLTGRSSPDTEGALTL 113
Query: 423 DALIMDGKTMNVGAVGALRRIKNAISV 503
+A IMDG+++ GAV + ++NAI V
Sbjct: 114 EAAIMDGESLEYGAVAGMNGVRNAILV 140
>AY061074-1|AAL28622.1| 365|Drosophila melanogaster LD05057p
protein.
Length = 365
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 285 RAWGVIESGNSALDAIEQGATVCEVEQCDGT-VGYGGSPDEDGETTLDALIMDGKTMNVG 461
RA ++ +G SA+DA E A + +E C T GYG + DG DA IMDG T+N G
Sbjct: 30 RATEILRNGGSAVDACE--AAIVRLENCGYTNAGYGSNLCMDGSVQCDAAIMDGSTLNFG 87
Query: 462 AVGALRRIKNAISV 503
A + R+KN I +
Sbjct: 88 ACTNVSRVKNPIQL 101
>AE014296-2628|AAF49544.2| 365|Drosophila melanogaster CG5241-PA
protein.
Length = 365
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 285 RAWGVIESGNSALDAIEQGATVCEVEQCDGT-VGYGGSPDEDGETTLDALIMDGKTMNVG 461
RA ++ +G SA+DA E A + +E C T GYG + DG DA IMDG T+N G
Sbjct: 30 RATEILRNGGSAVDACE--AAIVRLENCGYTNAGYGSNLCMDGSVQCDAAIMDGSTLNFG 87
Query: 462 AVGALRRIKNAISV 503
A + R+KN I +
Sbjct: 88 ACTNVSRVKNPIQL 101
>AY061292-1|AAL28840.1| 332|Drosophila melanogaster LD20519p
protein.
Length = 332
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 288 AWGVIE-----SGNSALDAIEQGATVCEVEQCDGTVGYGGSPDEDGETTLDALIMDGKTM 452
AWG++ G SALDA+E E+++ + GYG + G+ L+A +M+G+ +
Sbjct: 34 AWGLLSPDNGSGGGSALDAVEAAVRSMELDE-NFNAGYGSCLNTSGQVELEASLMEGRDL 92
Query: 453 NVGAVGALRRIKNAISV 503
G + LR + + I+V
Sbjct: 93 RAGCITLLRDVMHPITV 109
>AE014298-2171|AAF48471.1| 332|Drosophila melanogaster CG7860-PA
protein.
Length = 332
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 288 AWGVIE-----SGNSALDAIEQGATVCEVEQCDGTVGYGGSPDEDGETTLDALIMDGKTM 452
AWG++ G SALDA+E E+++ + GYG + G+ L+A +M+G+ +
Sbjct: 34 AWGLLSPDNGSGGGSALDAVEAAVRSMELDE-NFNAGYGSCLNTSGQVELEASLMEGRDL 92
Query: 453 NVGAVGALRRIKNAISV 503
G + LR + + I+V
Sbjct: 93 RAGCITLLRDVMHPITV 109
>AE014296-3022|AAN11678.1| 136|Drosophila melanogaster CG32198-PB
protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 475 SAPTAPTFMVFP-SIMRASNVVSPSSSGLPPYPTVPSHCSTSQTVAPCSIASRAE 314
++PT+PT P S ++ SP+S P PT P ST+ T AP + ++ E
Sbjct: 28 TSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTTPD-ASTATTAAPSTASTTTE 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,343,422
Number of Sequences: 53049
Number of extensions: 430651
Number of successful extensions: 1724
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -