Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_C02
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
          protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 12 LSDIHVGVLMRA 47
          LSD+H G+L++A
Sbjct: 43 LSDVHTGILIKA 54


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 213 PNWSFAPFK 187
           P+WSFA FK
Sbjct: 109 PDWSFAEFK 117


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 39  MRAGGILADNSSGETENLHFVSRR 110
           MRA   + +N + +   LH+ S+R
Sbjct: 114 MRAPSFICENETRQGLTLHYRSKR 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,110
Number of Sequences: 438
Number of extensions: 3130
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)