Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_C01
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 171 2e-43
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z11505-3|CAA77584.2| 468|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 28 3.9
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 28 3.9
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 27 5.2
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 27 5.2
AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription... 27 5.2
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 27 5.2
AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related ... 27 5.2
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 27 5.2
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 27 5.2
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 27 5.2
AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein. 27 5.2
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 27 6.9
U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 171 bits (417), Expect = 2e-43
Identities = 72/111 (64%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Frame = +1
Query: 145 KESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELA 321
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L
Sbjct: 204 EKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLT 263
Query: 322 KVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAF 474
FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF
Sbjct: 264 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAF 314
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 171 bits (417), Expect = 2e-43
Identities = 72/111 (64%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Frame = +1
Query: 145 KESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELA 321
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L
Sbjct: 212 EKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLT 271
Query: 322 KVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAF 474
FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF
Sbjct: 272 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAF 322
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 171 bits (417), Expect = 2e-43
Identities = 72/111 (64%), Positives = 94/111 (84%), Gaps = 1/111 (0%)
Frame = +1
Query: 145 KESKDPFDSMPKGSFNMDDFKRFYSNEEEA-KSIPYFWEKFDPEHYSIWYCQYKYPEELA 321
++SKDPF MPKG+F +D+FKR YSNE+ A K+IP+FWE FD +++SIW C+YKYPE+L
Sbjct: 237 EKSKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLT 296
Query: 322 KVFMSCNLITGMFQRLDKMRKQAFASVCLFGGDNDSTISGVWVWRGHELAF 474
FMSCNLI GM+QRL+K++K AFAS+ LFG DN+STISG+WVW+G +LAF
Sbjct: 297 LAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAF 347
>Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical
protein F35E2.7 protein.
Length = 633
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 217 SNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELA 321
SN ++A + W D EH ++ YC+Y+ P LA
Sbjct: 406 SNIDDAIRLNNDWNIHDIEHLNVPYCKYETPGPLA 440
>Z11505-3|CAA77584.2| 468|Caenorhabditis elegans Hypothetical
protein F59B2.5 protein.
Length = 468
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 131 LMRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRSL 265
++R+P SP+TR RGLS S KR + L+ R L
Sbjct: 49 MVRSPGSPRTRDAHKNRGLSAQTAKSSEAEVKRCEDLILSYSRQL 93
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 172 MPKGSFNMDDFKRFYSNE-EEAKSI 243
+ GS N+D + RFYS+E +E KS+
Sbjct: 60 LSNGSLNLDSYDRFYSSERKEWKSV 84
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 172 MPKGSFNMDDFKRFYSNE-EEAKSI 243
+ GS N+D + RFYS+E +E KS+
Sbjct: 60 LSNGSLNLDSYDRFYSSERKEWKSV 84
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 166 DSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELAKVFM 333
+S P G +++ +++S+ +IPYF E+ PE + W ++ L FM
Sbjct: 178 ESAPDGRLKLNEIYQWFSD-----NIPYFGERSSPEEAAGWKNSIRHNLSLHSRFM 228
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 166 DSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFDPEHYSIWYCQYKYPEELAKVFM 333
+S P G +++ +++S+ +IPYF E+ PE + W ++ L FM
Sbjct: 178 ESAPDGRLKLNEIYQWFSD-----NIPYFGERSSPEEAAGWKNSIRHNLSLHSRFM 228
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 163 FDSMPKGSFNMDDFKRFYSNEEEAKSIPYFWEKFD 267
++ +P G + FK + +EEE + P+ ++K D
Sbjct: 154 WEDLPDGWLTAETFKNKFYDEEEVTNNPFGYQKLD 188
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 223 EEEAKSIPYFWEKF-DPEHYSIWY 291
EEE K +P WEK DP+ YS ++
Sbjct: 141 EEEPKDLPPGWEKHEDPQGYSYYW 164
>AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription
factor RUN protein.
Length = 301
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 134 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 262
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 220 NEEEAKSIPYFWEKFDPEHYSIW-YCQYKYPEELAKVFMS 336
N+ + K P + KF PE+Y +W Y +E ++ ++S
Sbjct: 49 NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYIS 88
>AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related
protein 1 protein.
Length = 301
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 134 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 262
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 223 EEEAKSIPYFWEKF-DPEHYSIWY 291
EEE K +P WEK DP+ YS ++
Sbjct: 118 EEEPKDLPPGWEKHEDPQGYSYYW 141
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 223 EEEAKSIPYFWEKF-DPEHYSIWY 291
EEE K +P WEK DP+ YS ++
Sbjct: 259 EEEPKDLPPGWEKHEDPQGYSYYW 282
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 223 EEEAKSIPYFWEKF-DPEHYSIWY 291
EEE K +P WEK DP+ YS ++
Sbjct: 229 EEEPKDLPPGWEKHEDPQGYSYYW 252
>AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein.
Length = 301
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 134 MRNPRSPKTRLTRCQRGLSIWMTSSVSILTKRRRNRFLTSGRS 262
++ P SP++ + +++ + S+ +KRRRN +TS S
Sbjct: 250 LKRPSSPRSITKSSETSINLIQETPESVESKRRRNVSITSSNS 292
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 288 PDGVVLGIKLLPEVRNRFRLLFVRIETLEVIHIERPLWHRVKR 160
P+G ++ + RN R+ + +E + +H P++HR KR
Sbjct: 75 PNGAPYPLRPHSDTRNAHRVYPIPVEPPQRVHSIPPVYHRQKR 117
>U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical
protein F35D2.1 protein.
Length = 410
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 391 FASVCLFGGDNDSTISGVWVWRGHEL 468
FA+ G D D IS V WRGHEL
Sbjct: 96 FANQFSGGVDLDPAISRVSHWRGHEL 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,743,453
Number of Sequences: 27780
Number of extensions: 155188
Number of successful extensions: 560
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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