Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B22
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p...    96   2e-20
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr...    96   2e-20
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr...    44   6e-05
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    40   0.002
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    39   0.003
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    34   0.069
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    34   0.069
AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical ...    34   0.091
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ...    31   0.48 
AB006659-1|BAA21847.1|  655|Caenorhabditis elegans E6-AP ubiquit...    31   0.48 
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical...    29   1.9  
AF077542-13|AAC26302.1|  294|Caenorhabditis elegans Hypothetical...    28   5.9  
Z71177-7|CAI46554.1|  351|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U88314-4|AAK71360.1|  494|Caenorhabditis elegans Let-23 fertilit...    27   7.9  
AF045611-1|AAC38960.1|  494|Caenorhabditis elegans inositol tris...    27   7.9  

>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
            protein F36A2.13 protein.
          Length = 2944

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = +3

Query: 9    WTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIK 188
            WTGSPALPA+ + +    SV +RP +D  LPTANTCISRLY+P+YSS+ VL+ KLLLAIK
Sbjct: 2879 WTGSPALPAAGK-WPTSASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIK 2937

Query: 189  TKNFGFV 209
             KNFGFV
Sbjct: 2938 AKNFGFV 2944


>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
            F36A2.13 protein.
          Length = 2944

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = +3

Query: 9    WTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIK 188
            WTGSPALPA+ + +    SV +RP +D  LPTANTCISRLY+P+YSS+ VL+ KLLLAIK
Sbjct: 2879 WTGSPALPAAGK-WPTSASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIK 2937

Query: 189  TKNFGFV 209
             KNFGFV
Sbjct: 2938 AKNFGFV 2944


>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
            D2085.4 protein.
          Length = 1001

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 12   TGSPALPASE-EGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIK 188
            TG    P    +  QP   V + P+ D  LPT+ TC++ L IP YS+R  L+ KL  AI 
Sbjct: 934  TGCSRAPVDGFKSIQPRMGVLVIPSSDDELPTSATCMNMLRIPKYSNRTKLEEKLRYAIN 993

Query: 189  T 191
            +
Sbjct: 994  S 994


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 87   DAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIKTKNF 200
            D   P+ NTC+  L +P YSS  +L+ +LL AI  K F
Sbjct: 2721 DGSYPSVNTCVHYLKLPEYSSSAILRERLLTAINEKGF 2758


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +3

Query: 96   LPTANTCISRLYIPLYSSRHVLKHKLLLAIK--TKNFGF 206
            LP A+TC ++L +P Y S   L+  LLLAI+  T+ FGF
Sbjct: 4138 LPAAHTCFNQLDLPQYESYEKLRQSLLLAIRECTEGFGF 4176


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical protein
            F45H7.6 protein.
          Length = 889

 Score = 34.3 bits (75), Expect = 0.069
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = +3

Query: 12   TGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANTCISRLYIPLYSSRHVLKHKLL 176
            TGS ++P    ++  G + +    I    DA   P A+TC +RL +P Y+++  LK KL 
Sbjct: 818  TGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHTCFNRLQLPSYNTKQQLKSKLQ 877

Query: 177  LAI 185
             AI
Sbjct: 878  QAI 880


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical protein
            F45H7.6 protein.
          Length = 889

 Score = 34.3 bits (75), Expect = 0.069
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = +3

Query: 12   TGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANTCISRLYIPLYSSRHVLKHKLL 176
            TGS ++P    ++  G + +    I    DA   P A+TC +RL +P Y+++  LK KL 
Sbjct: 818  TGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHTCFNRLQLPSYNTKQQLKSKLQ 877

Query: 177  LAI 185
             AI
Sbjct: 878  QAI 880


>AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical
           protein Y92H12A.2 protein.
          Length = 724

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 96  LPTANTCISRLYIPLYSSRHVLKHKLLLAIK 188
           LP A+TC +RL +P Y++   LK KLL AI+
Sbjct: 685 LPRAHTCFNRLDLPPYTTFKELKSKLLTAIE 715


>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
            protein Y39A1C.2 protein.
          Length = 1066

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 96   LPTANTCISRLYIPLYSSRHVLKHKLLLAI 185
            LPTA+TC + L +P Y+ + +L  KL  AI
Sbjct: 1028 LPTASTCFNLLKLPNYNKKSLLLEKLRYAI 1057


>AB006659-1|BAA21847.1|  655|Caenorhabditis elegans E6-AP
           ubiquitin-protein ligase protein.
          Length = 655

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 96  LPTANTCISRLYIPLYSSRHVLKHKLLLAI 185
           LPTA+TC + L +P Y+ + +L  KL  AI
Sbjct: 617 LPTASTCFNLLKLPNYNKKSLLLEKLRYAI 646


>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
            protein Y48G8AL.1 protein.
          Length = 1019

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 12   TGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIK- 188
            TGS  +P S  G++ + +  I+P+    LP A+TC + L +P  +    L  +L ++I+ 
Sbjct: 956  TGSTRIPVS--GWEELHAA-IQPSAPESLPVAHTCFNLLDLPNIADDVELLRRLRISIEH 1012

Query: 189  TKNF 200
            T+ F
Sbjct: 1013 TEGF 1016


>AF077542-13|AAC26302.1|  294|Caenorhabditis elegans Hypothetical
           protein Y57G7A.10a protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 30  PAS--EEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIKTKNF 200
           PAS  +E +  +  V I   D A +  A  CI +L+     S  VLK K +    T+++
Sbjct: 44  PASLGDEQWAVLEQVCIAALDAARVDLAQDCIDQLHAQFPKSNRVLKLKAMQLESTEHY 102


>Z71177-7|CAI46554.1|  351|Caenorhabditis elegans Hypothetical
           protein AC3.10 protein.
          Length = 351

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 303 KFCIILD--CICVSLFIFHYNYLYVKFRLYVLHDQNIHDWVYLT 428
           K CI  D  C  +++ + H NY Y  F LY+++   +  W  LT
Sbjct: 175 KCCIKYDHHCPWINMCVTHVNYKY--FLLYIIYTSFLVYWYLLT 216


>Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical
           protein F56D5.10 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 258 WKTAAVFH*YRFIKQKFCIILDCICVSLFIFHYNYLYVKFRLYVLHDQNI 407
           WK+ A       +K++  +I     + +++  Y  LY+  RLY  H +N+
Sbjct: 174 WKSTASSISLSHVKRENEMIRQACFIGVYLSVYEILYLHMRLYPQHFENL 223


>U88314-4|AAK71360.1|  494|Caenorhabditis elegans Let-23 fertility
           effector/regulatorprotein 2, isoform a protein.
          Length = 494

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 441 NITIQSDIPSHVYFGRVAHKV*ILHIDSCSEI*KEKHK 328
           NITI    P H    R AH   I  ID CS + +E H+
Sbjct: 58  NITILMSAPQHRQLRRAAHITKIASIDLCS-LEEEDHE 94


>AF045611-1|AAC38960.1|  494|Caenorhabditis elegans inositol
           trisphosphate 3-kinaseform 1 protein.
          Length = 494

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 441 NITIQSDIPSHVYFGRVAHKV*ILHIDSCSEI*KEKHK 328
           NITI    P H    R AH   I  ID CS + +E H+
Sbjct: 58  NITILMSAPQHRQLRRAAHITKIASIDLCS-LEEEDHE 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,824,047
Number of Sequences: 27780
Number of extensions: 293790
Number of successful extensions: 592
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)