Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B20
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   0.89 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   3.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   4.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   8.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 0.89
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 373 KFSKLSKDFMGKSLSLKLITKSHFQPNSKTSFIAESNILSKDAPPQIVENLL 218
           K SKL K      L + +I     Q  S   +  E NI++K  P   VEN++
Sbjct: 353 KNSKLEKVIKHDILRMLIIDLRKKQLKSLEDWENEMNIITKGKPLIRVENII 404


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 239 RWCVFAQNVTLS 274
           R+C+F  NVTL+
Sbjct: 603 RYCLFGHNVTLA 614


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 352 DFMGKSLSLKLITKSH 305
           D  GK+LS KL  K H
Sbjct: 375 DVCGKTLSTKLTLKRH 390


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 133 IFMLIRDKTISIENY 177
           IF+LIR K+ S+ N+
Sbjct: 135 IFLLIRFKSFSLLNF 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,447
Number of Sequences: 438
Number of extensions: 1719
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)