Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B19
(365 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 0.69
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 27 0.91
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 27 0.91
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 2.1
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 25 3.7
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 25 3.7
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 25 4.9
SPAC4H3.09 |||mitochondrial type II fatty acid synthase componen... 25 4.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 4.9
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 4.9
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 24 6.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 24 6.4
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 24 6.4
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 24 8.5
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 24 8.5
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 24 8.5
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 24 8.5
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.5 bits (58), Expect = 0.69
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 230 ANDLGTSSLSQPILYTTSGQETAAAAAPVSDGSTAS 337
ANDL T+S S+P+++ T + T A P ++ ST S
Sbjct: 133 ANDLDTTSDSKPVVHQT--RATRKPAQPKAEKSTTS 166
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 27.1 bits (57), Expect = 0.91
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 22 TSEGSCRTNTTFRSFKLGSTNEEPSNCVLIPRILESLRGEGSRKTGH 162
T+ G R NT+F S G+TN N +L + S G R T H
Sbjct: 387 TTSGRQR-NTSFFSNSTGNTNPSAFNGLLTSSRIPSYNGSKVRSTSH 432
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 0.91
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 169 LASVQFFWNLRPVSSPEYAV*VHSLRVLRWWIPT*KNGMWCWCDMSLQMS 20
L ++ F + PVS PEY H L +L W P K CW D S ++
Sbjct: 220 LTNLDFSADQGPVSDPEYFPVYHKL-LLFWQKPARK----CWWDSSTSIT 264
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 2.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 245 TSSLSQPILYTTSGQETAAAAAPVSDGSTASAVGVAMAC 361
T+S S + TTS TA+ P+S ST + ++ C
Sbjct: 754 TTSTSTGSVTTTSTTATASCTLPISYTSTPTTTSISGTC 792
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 3.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 354 IATPTAEAVDPSE-TGXXXXAVS*PLVVYSIG*LSDEVPRSLAAVNTHSY 208
+AT T E +DP+E G + + P VV +SDE ++ V+ H +
Sbjct: 273 VATKTVEKIDPAEKVGLLVSSHNHPCVV-EYSEISDEACKATENVDGHKH 321
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.0 bits (52), Expect = 3.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 224 TAANDLGTSSLSQPILYTTSGQETAAAAAPVSDGSTASAV 343
TAA D T+S + + AA+ PV+ S A++V
Sbjct: 66 TAAGDAETTSSVAASVTPAASSSVAASVTPVASSSVAASV 105
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 24.6 bits (51), Expect = 4.9
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +1
Query: 217 CIDSCQ*SWHFVTKSTDTVYHEW 285
CI + W+++TK +D + W
Sbjct: 387 CITAAAFPWYYITKGSDVITDIW 409
>SPAC4H3.09 |||mitochondrial type II fatty acid synthase
component|Schizosaccharomyces pombe|chr 1|||Manual
Length = 112
Score = 24.6 bits (51), Expect = 4.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 191 LQDDVRYECVLTAANDLGTSSLSQPILYTTSGQETAAAAAPVSDGSTASAVGVAMACI 364
+QD + T ANDLG SL + + +E + P D ++VG A++ I
Sbjct: 49 IQDPKKVTPTSTFANDLGLDSL-DAVEVVMAIEEEFSIQIPDKDADEITSVGDAISYI 105
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 4.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 245 TSSLSQPILYTTSGQETAAAAAPVSDGSTA 334
TS+ + TTSG T++A+ P+S+ + A
Sbjct: 617 TSTFTSSGFNTTSGLPTSSASTPLSNSTVA 646
Score = 24.6 bits (51), Expect = 4.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 245 TSSLSQPILYTTSGQETAAAAAPVSDGSTA 334
TS+ + TTSG T++A+ P+S+ + A
Sbjct: 679 TSTFTSSGFNTTSGLPTSSASTPLSNSTVA 708
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 24.6 bits (51), Expect = 4.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 160 VQFFWNLRPVSSPEYAV*VHSLRVLRWWIPT*KNGMWCWCDMSL 29
+ +F +L + +Y + V SLR+LR + +W + SL
Sbjct: 629 LDYFLSLSVIEDADYQICVSSLRLLREFTRFAATDVWAYVTRSL 672
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 24.2 bits (50), Expect = 6.4
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Frame = +1
Query: 244 HFVTKSTDTVYHEWSRDCCSRRS---CL-GRVDS 333
+ VT STD + H W D SR S CL +VDS
Sbjct: 307 NIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDS 340
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 224 TAANDLGTSSLSQPILYTTSGQETAAAAAPVSDGSTASAVGVAMACI 364
T+A+ +S+ + TTS +++++ P+S T+S A + +
Sbjct: 137 TSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSV 183
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 24.2 bits (50), Expect = 6.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 217 TFVSYVVL*SSEYDARLASVQFFWNLRPVS 128
+F + + + YDA + S++FF+N VS
Sbjct: 561 SFNGHTINENMRYDAHMDSIEFFYNFILVS 590
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 23.8 bits (49), Expect = 8.5
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -1
Query: 125 SRIRGISTQFEGSSLVDPNLKERNVVLV 42
SR+R S + S++V+P+L + ++ ++
Sbjct: 303 SRVRSFSNYVKSSNVVNPSLSQASLEII 330
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 23.8 bits (49), Expect = 8.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 95 QTVYLYRVFWRAYGAKVPEKLDTSETSVVLTGLQDDVRY 211
+ + LY++ W YGA E D S + + Q ++R+
Sbjct: 649 ENLILYKIQWNDYGAMALEN-DISSLITIFSNDQANLRH 686
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 23.8 bits (49), Expect = 8.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 220 IDSCQ*SWHFVTKSTDTVY 276
I C+ W F ++STDT Y
Sbjct: 3671 IKQCEFPWSFSSESTDTGY 3689
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 23.8 bits (49), Expect = 8.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -1
Query: 350 RLPPQKLSTRPRQERRLQQSLDHS 279
+LPP RP Q R LDH+
Sbjct: 850 KLPPTDTRLRPDQRYRENNDLDHA 873
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,612,479
Number of Sequences: 5004
Number of extensions: 31312
Number of successful extensions: 123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 114084208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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