Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B16
(493 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.58
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 25 0.58
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 1.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 3.1
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 4.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 4.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 4.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 4.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.1
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 9.4
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 372 HLQHNMYQSQQQTE 413
H QH MYQ QQQ++
Sbjct: 198 HEQHMMYQQQQQSQ 211
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +2
Query: 44 IKHQHSINNTSKRNTIIMNKENENYSNKRRK 136
I++ H +NN N N +N+N +K
Sbjct: 409 IRNTHCVNNNQNDNIQNTNNQNDNNQKNNKK 439
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 35 ILEIKHQHSINNTSKRNTIIMNKENENYSNKRRKL 139
I + + + +N + N N N NY+N +KL
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKL 116
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 35 ILEIKHQHSINNTSKRNTIIMNKENENYSNKRRKL 139
I + + + +N + N N N NY+N +KL
Sbjct: 82 ISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKL 116
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 35 ILEIKHQHSINNTSKRNTIIMNKENENYSNKRRKLSTSGTDD 160
+LE ++S N+T N N N +N + +G +D
Sbjct: 215 VLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGAND 256
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 38 LEIKHQHSINNTSKRNTIIMNKENENYSNKRR 133
L K H+ NN + N N N NY+N ++
Sbjct: 85 LSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKK 116
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 239 VASTRVNHYRFPNLANNPNYRH-C*KIHH 156
+ S+ N+Y + N NN NY+ C I+H
Sbjct: 81 IISSLSNNYNYSNY-NNNNYKQLCYNINH 108
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSN 124
NNT N N N NY+N
Sbjct: 86 NNTIHNNNYKYNYNNNNYNN 105
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSN 124
NNT N N N NY+N
Sbjct: 86 NNTIHNNNYKYNYNNNNYNN 105
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 38 LEIKHQHSINNTSKRNTIIMNKENENYSNKRRKL 139
L +++S N N N N NY+N +KL
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKL 351
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSNK 127
NNT N N N NY+ K
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKK 107
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSNK 127
NNT N N N NY+ K
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKK 107
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSNK 127
NNT N N N NY+ K
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKK 107
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSNK 127
NNT N N N NY+ K
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKK 107
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/20 (30%), Positives = 16/20 (80%)
Frame = +2
Query: 236 LPSINDTSPLSPIKAEVHAA 295
+P +ND++ LSP++ ++ ++
Sbjct: 798 VPQVNDSTILSPVREKLSSS 817
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 62 INNTSKRNTIIMNKENENYSN 124
I T KR +KENE Y+N
Sbjct: 323 IQITPKRIQYAQHKENELYAN 343
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 62 INNTSKRNTIIMNKENENYSN 124
I T KR +KENE Y+N
Sbjct: 361 IQITPKRIQYAQHKENELYAN 381
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 50 HQHSINNTSKRNTIIMNKENENYSNKRR 133
H ++ N + N N N NY+N ++
Sbjct: 324 HNNNNYNNNNYNNNYNNYNNNNYNNYKK 351
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +2
Query: 65 NNTSKRNTIIMNKENENYSNKRRKLSTSGT 154
++TSK++ I+ + + + R+ T+GT
Sbjct: 278 SSTSKKSGIVRSHQQSCINRVARETKTAGT 307
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,705
Number of Sequences: 438
Number of extensions: 2405
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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