Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_B13
(517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 215 2e-56
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 212 1e-55
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 212 1e-55
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 211 2e-55
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 209 8e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 208 1e-54
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 107 4e-24
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 107 4e-24
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 75 4e-14
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 75 4e-14
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 75 4e-14
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 75 4e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 70 9e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 70 1e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 70 1e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 69 2e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 69 2e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 68 5e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 68 5e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 62 2e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical... 28 3.4
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.0
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 6.0
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 8.0
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 27 8.0
AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 215 bits (524), Expect = 2e-56
Identities = 109/153 (71%), Positives = 118/153 (77%), Gaps = 1/153 (0%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRA-PVPELTQQM 229
GVTT + P + + P F F +P R S R+ VPELTQQM
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRGSQQYRSLTVPELTQQM 293
Query: 230 FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 409
FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 410 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
CDIPPRG+KMAATF+GNSTAIQELFKRISEQFT
Sbjct: 354 CDIPPRGVKMAATFVGNSTAIQELFKRISEQFT 386
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVS+TMS
Sbjct: 221 TYGDLNHLVSMTMS 234
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 212 bits (518), Expect = 1e-55
Identities = 109/153 (71%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRA-PVPELTQQM 229
GVTT + P + + P F F +P R + RA VPELTQQ
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRSNQQYRAITVPELTQQC 293
Query: 230 FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 409
FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 410 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
CDIPPRGLKM+ATFIGNSTAIQELFKRISEQFT
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVS TMS
Sbjct: 221 TYGDLNHLVSATMS 234
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 212 bits (518), Expect = 1e-55
Identities = 109/153 (71%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRA-PVPELTQQM 229
GVTT + P + + P F F +P R + RA VPELTQQ
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF-APLTSRSNQQYRAITVPELTQQC 293
Query: 230 FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 409
FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAV
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 410 CDIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
CDIPPRGLKM+ATFIGNSTAIQELFKRISEQFT
Sbjct: 354 CDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVS TMS
Sbjct: 221 TYGDLNHLVSATMS 234
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 211 bits (516), Expect = 2e-55
Identities = 105/152 (69%), Positives = 112/152 (73%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRAPVPELTQQMF 232
GVTT + P + + P F F A V ELTQQMF
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMF 294
Query: 233 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 412
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 413 DIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
DIPPRGLKMAATF+GNSTAIQELFKRISEQFT
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELFKRISEQFT 386
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVSLTMS
Sbjct: 221 TYGDLNHLVSLTMS 234
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 209 bits (511), Expect = 8e-55
Identities = 104/152 (68%), Positives = 112/152 (73%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRAPVPELTQQMF 232
GVTT + P + + P F F A V ELTQQMF
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMF 294
Query: 233 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 412
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVC 354
Query: 413 DIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
DIPPRGLKMAATF+GNSTAIQELFKRISEQFT
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELFKRISEQFT 386
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVSLTMS
Sbjct: 221 TYGDLNHLVSLTMS 234
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 208 bits (509), Expect = 1e-54
Identities = 103/152 (67%), Positives = 112/152 (73%)
Frame = +2
Query: 53 GVTTVSQVPWSVECGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAVPRAPVPELTQQMF 232
GVTT + P + + P F F A V ELTQQMF
Sbjct: 235 GVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMF 294
Query: 233 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 412
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 413 DIPPRGLKMAATFIGNSTAIQELFKRISEQFT 508
DIPPRGLKM+ATFIGNSTAIQELFKRISEQFT
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 10 TYGDLNHLVSLTMS 51
TYGDLNHLVS+TMS
Sbjct: 221 TYGDLNHLVSVTMS 234
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 107 bits (258), Expect = 4e-24
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
+ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +
Sbjct: 285 ISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESL 343
Query: 386 PNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQF 505
P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF
Sbjct: 344 PKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQF 383
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 72 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 182
RF G L D+RKL N PRLHFFM FAP+ +G
Sbjct: 242 RFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKG 276
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 4 RGTYGDLNHLVSLTMS--WRYHRVSGSLVS*MR 96
R TYGDLNHL SL +S + R G+L + +R
Sbjct: 220 RVTYGDLNHLASLALSGITTFQRFKGNLKTDIR 252
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 107 bits (258), Expect = 4e-24
Identities = 50/100 (50%), Positives = 74/100 (74%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
+ +LTQQ+ DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +
Sbjct: 285 ISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESL 343
Query: 386 PNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQF 505
P + T VCDIP RGLK +ATFI NSTAIQE KRIS+QF
Sbjct: 344 PKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQF 383
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 72 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 182
RF G L D+RKL N PRLHFFM FAP+ +G
Sbjct: 242 RFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKG 276
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 4 RGTYGDLNHLVSLTMS--WRYHRVSGSLVS*MR 96
R TYGDLNHL SL +S + R G+L + +R
Sbjct: 220 RVTYGDLNHLASLALSGITTFQRFKGNLKTDIR 252
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 74.5 bits (175), Expect = 4e-14
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAV-PRAPVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
SP + + A + V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ +
Sbjct: 273 SPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 497 EQF 505
+F
Sbjct: 393 HKF 395
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 48 VLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPSSHSR 227
V ++ LRF G LN DL + N+VP+PR+HF + F+P+ S + L +
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 228 C 230
C
Sbjct: 295 C 295
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 74.5 bits (175), Expect = 4e-14
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAV-PRAPVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
SP + + A + V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ +
Sbjct: 272 SPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 331
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 332 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 391
Query: 497 EQF 505
+F
Sbjct: 392 HKF 394
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 48 VLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPSSHSR 227
V ++ LRF G LN DL + N+VP+PR+HF + F+P+ S + L +
Sbjct: 234 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 293
Query: 228 C 230
C
Sbjct: 294 C 294
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 74.5 bits (175), Expect = 4e-14
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAV-PRAPVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
SP + + A + V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ +
Sbjct: 273 SPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 497 EQF 505
+F
Sbjct: 393 HKF 395
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 48 VLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPSSHSR 227
V ++ LRF G LN DL + N+VP+PR+HF + F+P+ S + L +
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 228 C 230
C
Sbjct: 295 C 295
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 74.5 bits (175), Expect = 4e-14
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAV-PRAPVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
SP + + A + V E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ +
Sbjct: 273 SPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAI 332
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 333 ATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLD 392
Query: 497 EQF 505
+F
Sbjct: 393 HKF 395
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 48 VLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPSSHSR 227
V ++ LRF G LN DL + N+VP+PR+HF + F+P+ S + L +
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNM 294
Query: 228 C 230
C
Sbjct: 295 C 295
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 71.7 bits (168), Expect = 3e-13
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V E+T+ F+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W
Sbjct: 283 VDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWC 342
Query: 386 PNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQF 505
P K + PP + A + N+TAI E ++R+ +F
Sbjct: 343 PTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKF 390
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY 194
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S ++
Sbjct: 228 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHHEF 280
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 70.1 bits (164), Expect = 9e-13
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V E+TQQ F+ M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W
Sbjct: 293 VAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWC 352
Query: 386 PNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQF 505
P K + PP L+ A + N+TAI E + R+ +F
Sbjct: 353 PTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKF 400
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 176
+A + ++ LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 236 IAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIIS 282
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAVPRA-PVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
+P + + A A V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ +
Sbjct: 271 TPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAI 330
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K + FV+W P K + PP + A + N+TAI E + R+
Sbjct: 331 AAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD 390
Query: 497 EQF 505
+F
Sbjct: 391 YKF 393
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPS 215
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSD 288
Query: 216 SHSRC 230
+ C
Sbjct: 289 ITNSC 293
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAVPRA-PVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
+P + + A A V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ +
Sbjct: 271 TPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAI 330
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K + FV+W P K + PP + A + N+TAI E + R+
Sbjct: 331 AAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD 390
Query: 497 EQF 505
+F
Sbjct: 391 YKF 393
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALPSPS 215
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSD 288
Query: 216 SHSRC 230
+ C
Sbjct: 289 ITNSC 293
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 286 VNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 386 PNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQF 505
P K + PP + A + N+TAI E + R+ +F
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKF 393
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 203
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEAL 284
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V E+T F+ + M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W
Sbjct: 288 VSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWC 347
Query: 386 PNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQF 505
P K + PP L+ A + N+TAIQE + R+ +F
Sbjct: 348 PTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKF 395
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 176
+A V ++ LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 231 LAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIIS 277
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W
Sbjct: 286 VNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345
Query: 386 PNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQF 505
P K + PP + A + N+TAI E + R+ +F
Sbjct: 346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKF 393
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 203
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEAL 284
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAVPRA-PVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
+P + + A A V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ +
Sbjct: 271 TPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAI 330
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 331 TAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD 390
Query: 497 EQF 505
+F
Sbjct: 391 YKF 393
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 203
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEAL 284
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 164 SPHVPRQSAVPRA-PVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 340
+P + + A A V ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ +
Sbjct: 271 TPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAI 330
Query: 341 LNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRIS 496
I+ K S FV+W P K + PP + A + N+TAI E + R+
Sbjct: 331 TAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLD 390
Query: 497 EQF 505
+F
Sbjct: 391 YKF 393
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 203
++ V ++ LRF G LN DL + N+VP+PR+HF + + PL S + AL
Sbjct: 229 ISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEAL 284
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW
Sbjct: 294 VSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWC 353
Query: 386 PNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQF 505
P K + PP + + I N+TAI E + R+ +F
Sbjct: 354 PTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKF 401
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 176
VA + ++ LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 237 VAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVS 283
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW
Sbjct: 266 VSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWC 325
Query: 386 PNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQF 505
P K + PP + + I N+TAI E + R+ +F
Sbjct: 326 PTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKF 373
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 176
VA + ++ LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 209 VAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVS 255
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 60.1 bits (139), Expect = 9e-10
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = +2
Query: 206 VPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 385
V ++T F+ N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W
Sbjct: 291 VQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWC 350
Query: 386 PNNVKTAV---CDIPPRG-----LKMAATFIGNSTAIQELFKRISEQF 505
P K + I G + A + N+TAI E + R+ +F
Sbjct: 351 PTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKF 398
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 36 VADHVLALPPCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 203
+A V ++ LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 234 IAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPL 289
>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
protein Y57A10A.15 protein.
Length = 1072
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -3
Query: 248 SCS*RRTSAV*ARGRERAVLLTAAGREGSETGHEEMQTWEWHH 120
+C ++T+A ++ EG E G E+ W WHH
Sbjct: 374 TCEQKKTAATRKIIESARLVAKRLDDEGEEIGPEKNDVWMWHH 416
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 322 LHRHT 308
L T
Sbjct: 813 LESMT 817
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 322 LHRHT 308
L T
Sbjct: 811 LESMT 815
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 322 LHRHT 308
L T
Sbjct: 813 LESMT 817
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 322 LHRHT 308
L T
Sbjct: 813 LESMT 817
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 322 LHRHT 308
L T
Sbjct: 811 LESMT 815
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 322 LHRHT 308
L T
Sbjct: 813 LESMT 817
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -1
Query: 502 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 323
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 322 LHRHT 308
L T
Sbjct: 813 LESMT 817
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 142 ISSCPVSLPSRPAAVSSTA---RSRPRAHTADVRR 237
++S P++ +RP + A ++R AHTADVRR
Sbjct: 449 MTSTPLTAATRPLKRTRAADRLKTRAEAHTADVRR 483
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 116 EHGAIPTSAFLHARFRSPHVPRQSAVPRAPVP 211
+ GA P+SA +H P +P + +P AP P
Sbjct: 489 DDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPP 520
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 284 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 382
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 142 ISSCPVSLPSRPAAVSSTA---RSRPRAHTADVRR 237
++S P++ +RP + A ++R AHTADVRR
Sbjct: 449 MTSTPLTAATRPLKRTRAADRLKTRAEAHTADVRR 483
>AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical
protein W06H8.4 protein.
Length = 351
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 145 SSCPVSLPSRPAAVSSTARSRP 210
+S PVS P+RP AVSST+++ P
Sbjct: 30 ASLPVSSPTRP-AVSSTSKTTP 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,549,186
Number of Sequences: 27780
Number of extensions: 273434
Number of successful extensions: 891
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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