Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_B13
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   1.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   2.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   2.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   10.0 
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   10.0 

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = -3

Query: 164  SETGH--EEMQTWEWHH---VHCQLAEIRIQLT 81
            SE+G    EM TW +HH    HC +   +++ T
Sbjct: 1665 SESGRLDTEMSTWGYHHNVNKHCTIHRTQVKET 1697


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +2

Query: 131  PTSAFLHARFRSPHVPRQ----SAVPRAPVPELTQQMFDAK-NMMAACDPRHGRY 280
            PT+A  H+R  S  +PRQ    S VP       T  +F  + +  A C P   +Y
Sbjct: 1766 PTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQY 1820


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 170 EGSETGHEEMQTWEWHHVHCQLAEIRIQLTREPET 66
           +GS T H E++     H+   L ++++ +   PET
Sbjct: 47  QGSRTTHNELEKNRRAHLRNCLEKLKVLVPLGPET 81


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 177 GT*GERNRA*RNADVGMAPCSLPACGDPHSTDQGT 73
           G  G   R   +  +G+  C L  CG  + T + T
Sbjct: 94  GILGTHGRQCNDTSIGVDGCDLMCCGRGYKTQEVT 128


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 177 GT*GERNRA*RNADVGMAPCSLPACGDPHSTDQGT 73
           G  G   R   +  +G+  C L  CG  + T + T
Sbjct: 95  GILGTHGRQCNDTSIGVDGCDLMCCGRGYKTQEVT 129


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 508 GELFRDALEQLLDGGRVTDEGR 443
           G +  + ++ +LD G  T+EGR
Sbjct: 37  GRILTNYIKCMLDEGPCTNEGR 58


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 508 GELFRDALEQLLDGGRVTDEGR 443
           G +  + ++ +LD G  T+EGR
Sbjct: 37  GRILTNYIKCMLDEGPCTNEGR 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,413
Number of Sequences: 438
Number of extensions: 3285
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)